Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02067 ATGATCCTCATCAAAATTCGTTTCTTCTTATTCTTTTGCCTTATTGGCATAGTCTCAGCTCAGTTGTCCTCTAATTTTTACGCCAAAAAGTGTCCTAATGTGCTTTCAACCATTAAAACAGAAGTAGACTCTGCAGTGAGCAAGGAGGCTCGCATGGGGGCCTCTCTGCTTCGTCTTCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCATCAGTACTATTGGACGATACATCAAGTTTCACAGGTGAGAAATCAGCGGGTCCCAACGCTAATTCACTCAGAGGCTTTGATGTTATAGACACCATAAAGTCCAAAGTAGAGAGCTTATGCCCTGGTGTTGTTTCTTGTGCTGATATCCTTGCTGTAGCAGCTAGAGACTCAGTTGTTGCTCTTCGTGGACGTAGTTGGACAGTGCAATTGGGCAGAAGAGACTCAACCACAGCAAGTTTAAGTTCTGCTAACTCAGACTTGCCAGGTCCCTCATTGGATTTAAGTGGCCTTATCTCTGCTTTCTCCAACAAAGGTTTCTCAACCAAAGAAATGGTTGCTCTTTCAGGATCTCACACAATTGGCCAAGCTAGATGCCTATTCTTCAGAACAAGGATTTACAACGAGACCAACATAGATTCCACCTTCGCAAAATCATTGCAAGCAAATTGTCCTAGCACAGGTGGTGATAACAATTTGTCCCCTCTTGACACCACCAGTCCAAACACCTTTGACAATGCTTACTTCAAGAACTTGCAGAGCCAAAAAGGTCTCTTCCACTCAGATCAAGAGCTATTCAATGGAGGATCCACAGACTCTCAAGTAAAGGCTTATAGCAGTGATCCTGCCAGTTTCAGAATTGACTTTGCCAATGCAATGATTAGAATGGGGAACCTTAGTCCACTCACGGGGTCTAGTGGCCAGATCAGGACCAATTGTAGGAAGACCAACTGA 945 0.4381 MILIKIRFFLFFCLIGIVSAQLSSNFYAKKCPNVLSTIKTEVDSAVSKEARMGASLLRLHFHDCFVQGCDASVLLDDTSSFTGEKSAGPNANSLRGFDVIDTIKSKVESLCPGVVSCADILAVAARDSVVALRGRSWTVQLGRRDSTTASLSSANSDLPGPSLDLSGLISAFSNKGFSTKEMVALSGSHTIGQARCLFFRTRIYNETNIDSTFAKSLQANCPSTGGDNNLSPLDTTSPNTFDNAYFKNLQSQKGLFHSDQELFNGGSTDSQVKAYSSDPASFRIDFANAMIRMGNLSPLTGSSGQIRTNCRKTN* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02067 314 CDD secretory_peroxidase 21 313 IPR033905 GO:0004601|GO:0042744
Rops8g02067 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Rops8g02067 314 ProSiteProfiles Plant heme peroxidase family profile. 21 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 Pfam Peroxidase 39 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PANTHER PEROXIDASE 72-RELATED 15 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Rops8g02067 314 Gene3D - 25 311 - -
Rops8g02067 314 SUPERFAMILY Heme-dependent peroxidases 21 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 FunFam Peroxidase 159 293 - -
Rops8g02067 314 Gene3D Peroxidase, domain 2 159 293 - -
Rops8g02067 314 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g02067 314 FunFam Peroxidase 25 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02067 Rops-Chr8 48339297 48341859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02067 17 314 Peroxidase AT5G05340 66.000 7.60e-147 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02067 K00430 - gmx:100815142 547.74