Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02031 ATGGGGAAGAAGAAGCAGAAAATCATTCTTCCGCCGGACCTCCCGCCGGAGATCCCAGACGACGAAGTTGAGATTTCCGACGATGACCTTCAATTCGTCAAGGAGAACCGCCGCTATGCCTCCTTGCTTTCCACCTTGGACACCCAATCCATCACCAAGCATGTTACACGGGTTGCTGATGCCAAAGATGACGCCTTGGAGAAACTTTATGAGCAACGCTTGCGAAAGAATGCTCTCAAGAAAGAAAAAGAAGAAACGGGTCTGCAGGTCGATCGTGTAGATGCTCTTCCGGTCAAGACCTTGGATGGAAAACTCTATTATCGGACAGCTACAAAGACTGTATCAGAAGATGGTCCGGGTGAAGAGGAAACTGCTGAGGATGGCAATGCAGACAAAGGTCTAGTGAAGCTAACTAAGGCCGAAAGGAGAGCCAAACTTAAGAAAATGAAAAAAGAGGAGAAAAAGCAAGGTAAAGAGGTGGCTAAAGCAGAAGTGGAAGAAACACCACAAGCAGCAGTGCTGGCTGAGGTTAAGGAAGATCTAAAAGTTGAGGAGGCATTCGAAAGTAAAAAACATAAACTTGCAGAGTTGGGAAGTGCCTTGCTTACAGACCCAGAATCCAATATTAAATTTCTGAAGGAGATGGTACAGATATCTAAAGATAATGATCATACCATTATTAAACTTGGACTTCTATCCCTCTTGGCTGTTTTCAAAGATATTATCCCTGGCTATCGGATCAGACTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCAAAGACCGTTAAAAAGATGCGTTATTTTGAATCAACTCTTCTTTCTGCATACAAGGCATACTTGCAAAGGCTGATAGCCTTAGAAAGGCAGCCTTTATTTCAGCTTGTTGCAGTTCGTTGTATTTGTTCTTTGCTTGATGCACATCCCCATTTCAACTTTCGTGAAAGCTTGTTGGACGCTACTGCCAGAAATATAAGCTCCACTAATGAAGCCATAAGGAAACTTTGTTGTTCCACAATTAAGTCACTCTTTTCAAATGAGGGTAAACATGGTGGTGAAGCTACTGCAGAGGCTGTTCGATTGATTTCTGATCATGTTAAAGCTCAAAATTGCCAGTTACACCCTGATTCTGTTGAGGTTTTCTTGTCTCTTTCATTTGATGGGGATCTTGGAAAGTCTAAAAGGATAGATGAGGATCAGAAATTAAAAAGCAAGAAAAGTAAGAAAAGAAAAAACATGGAGGCATCAAATCAGTTGCCGGAAAATGACAGAAAGAAAAGTAGGCGAGAGTTGATTTCCAAGACAAGAGAGGAGGTTGAAGCTGATTACAAGGCTGCATCATTTGCCACAGATGTTATGGAGAGGAGAGAAATGCAAACTAAAATACTCTCTGCTGTGTTTGAGACATACTTTCGCATTTTGAAGCATACGATGCAGTTCATAGTCACCAGGCCTGAAGCAAACCCTGGGGCATTATCTGCTGCAGTGGAATCCCACCCATTGCTTGCTCCATGTTTGAAAGGACTGGCAAAATTTTCACACCTGATTGACCTTGATTTCATGGGTGATCTAATGACCCATCTGAAAATACTTGCTTCTGGAAGTAGCAATTCAGGCGGCACTTCTGAGAAGTGTCCTAAATGTTTGACCGTATCTGAACGTCTCCAATGTTGCATTGTTGCTTTTAAAGTGATGAGGACCAATCTTGATGCCTTAAATGTTGATTTACATGACTTCTTTGTCCATCTTTACAATCTCATACTTGAATACAGGCCAGGAAGAGATCAAGGAGAGGTGTTAGCAGAAGCTTTGAAGATAATGTTGTGTGAAGATAAGCAACATGACATGCAAAAGACTGCTGCATTTATAAAACGTTTGGCTACATTGTCACTGTGCGTTGGATCTGCAGATTCCATGGCTGCCTTGGTCACAGTAAGGCATCTCCTTCAGAAGAATGTTAAGTGCAGAAATCTGTTGGAAAATGACACTGGAGGGGGCTCTGTTTCTGGCACAATTCCAAAATATCAACCACATTCCACGGACCCTAATTTAAGCGGTGCCCTTGCCTCAGTACTTTGGGAACTTAGTCTTTTGTCCAGGCATTATCATCCAGCCATATCAACAATGGCATCTGGCATTTCAAGCATGAGCACTGCACATAACCAAGTCATTCTCAACAAGTCCTCTCCTCAACAAGCTTTTGAGGAAATGTCTCTTGACCAGGAATTATGTTTCACACAAAGTGGCAGTATAAAATTAAATAACAAGAGGAGAAGAACAAATGGCCATCCTACATCACCTTCCATTGGTTCTACAACAGTAATGAGTTCATTCGATGAGGATGAGTTGCGAAGGAAACTTGGTTCACATTTTATGCTTCTTGATGACATCAAGGAGAATGAAAGGTTGAGAATTAAGTTGGACAGGACTGCACGATCACTACAACTATATGAACTGTATAAGACACAAAAGAAGCAACGATCAAAACCAAGAAGATGA 2499 0.4178 MGKKKQKIILPPDLPPEIPDDEVEISDDDLQFVKENRRYASLLSTLDTQSITKHVTRVADAKDDALEKLYEQRLRKNALKKEKEETGLQVDRVDALPVKTLDGKLYYRTATKTVSEDGPGEEETAEDGNADKGLVKLTKAERRAKLKKMKKEEKKQGKEVAKAEVEETPQAAVLAEVKEDLKVEEAFESKKHKLAELGSALLTDPESNIKFLKEMVQISKDNDHTIIKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKTVKKMRYFESTLLSAYKAYLQRLIALERQPLFQLVAVRCICSLLDAHPHFNFRESLLDATARNISSTNEAIRKLCCSTIKSLFSNEGKHGGEATAEAVRLISDHVKAQNCQLHPDSVEVFLSLSFDGDLGKSKRIDEDQKLKSKKSKKRKNMEASNQLPENDRKKSRRELISKTREEVEADYKAASFATDVMERREMQTKILSAVFETYFRILKHTMQFIVTRPEANPGALSAAVESHPLLAPCLKGLAKFSHLIDLDFMGDLMTHLKILASGSSNSGGTSEKCPKCLTVSERLQCCIVAFKVMRTNLDALNVDLHDFFVHLYNLILEYRPGRDQGEVLAEALKIMLCEDKQHDMQKTAAFIKRLATLSLCVGSADSMAALVTVRHLLQKNVKCRNLLENDTGGGSVSGTIPKYQPHSTDPNLSGALASVLWELSLLSRHYHPAISTMASGISSMSTAHNQVILNKSSPQQAFEEMSLDQELCFTQSGSIKLNNKRRRTNGHPTSPSIGSTTVMSSFDEDELRRKLGSHFMLLDDIKENERLRIKLDRTARSLQLYELYKTQKKQRSKPRR* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02031 832 MobiDBLite consensus disorder prediction 397 429 - -
Rops8g02031 832 PIRSF Noc3 1 805 IPR016903 -
Rops8g02031 832 MobiDBLite consensus disorder prediction 1 22 - -
Rops8g02031 832 Pfam Nucleolar complex-associated protein 190 280 IPR011501 -
Rops8g02031 832 MobiDBLite consensus disorder prediction 112 134 - -
Rops8g02031 832 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 818 IPR016903 -
Rops8g02031 832 MobiDBLite consensus disorder prediction 115 134 - -
Rops8g02031 832 MobiDBLite consensus disorder prediction 411 429 - -
Rops8g02031 832 Coils Coil 146 166 - -
Rops8g02031 832 SUPERFAMILY ARM repeat 210 518 IPR016024 -
Rops8g02031 832 Pfam CBF/Mak21 family 555 710 IPR005612 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02031 1 807 Core DNA Replication Machinery Family AT1G79150 58.273 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02031 K14834 - gmx:100776136 1316.21