Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02027 ATGCACGTTACTCTCTTCTTCCTTCTTTTCTTCTTCTACCATGTAGTTTCTCTCTCCTCCGATGGCCTCGCCCTTCTCACTCTAAAATCCGCGGTTGATGGAGACGGCGCCGCCGCATTCTCCGACTGGAACGAGAACGACCCCACGCCGTGCCGGTGGTCCGGAATCAGCTGCGCCAACATCTCCGGCGAGCAGGACCCCCGCGTCGTCGGCGTCTCACTCGCCGGAAAAGGACTCCGCGGTTACCTCCCATCGGAGCTCGGAAACCTCCTCTACCTCCGGCGACTCAGCCTCCACACCAACGCCTTCCACGGTTCAATCCCGGTGCAGCTATTCAACGCCACCGCACTCCACAGTATTTTCCTCCACGGAAACAACCTTTCCGGCGAACTCCCTCCCTCCGTTTGCAACCTCCCTCACCTCCAAAACCTCGACCTCTCCGACAACTCCCTCGCCGGCGACATCCCTAACTCCCTAGGAAACTGCTCGCAACTCCAGCGGTTGATCCTCGCACGCAACAATTTAGCCGGCGAGATTCCGGCGACTCCATGGCCGAAGCTGAAGAATCTCGTCCAGCTCGACCTGTCATCGAATGTTCTTTCAGGTCCGATCCCTGACCAAATCGGCGAACTCAGTTCCCTCGCCGGAACCCTAAACCTCTCATTCAACCACCTCTCCGGTAGGGTTCCGAAGTCTCTCGGAAAATTACCAGTAACAGTAAGCTTCGATCTTCGCAACAACGATCTCAGTGGCGAGATTCCTCAAACGGGGTCGTTTTCGAATCAGGGACCCACCGCGTTCCTAAACAACCCGAACCTTTGCGGGTTCCCTTTGCAAAAACCGTGCAACGGTTCAGCTCCGAGTGAACCGGGTTCACGTTCCGTTTCGAACCGGGAACAAGCAAACCGGTCCTCTAAAGGGTTAAGCCCCGGTTTGATAATTCTTATCTCAGTGGCTGATGCTGCTGGGGTGGCTTTGATTGGTCTTGTGATTGTGTATGTTTATTGGAAGAAGAAGGACAAGTCCAATGGGTGTAGTTGCACTGGGAAGACCAAGTTTGGTGGTGGGAACAATGATAAGAATTCAATTTTGTGTTGCTTTTGTGGGTCTTTGTTGCCATGTGTTAATGGGTTGAAGAGTGATGATTCTGAGGTGGAGGAGGGTGAGAAAGGAGAGGGAGAGGGAGAGGGTGGGAGAGGGGAAGGGGATTTGGTGGCAATTGATAAAGGTTTCAACTTTGAGCTTGATGAGTTGTTAAGGGCTTCTGCTTATGTGTTGGGGAAAAGTGGGTTGGGGATTGTGTATAAGGTGGTGCTTGGGAATGGGGTGCCTGTGGCTGTAAGGAGATTAGGGGAAGGTGGTGAACAGAGGTATAAAGAGTTTGCTGCTGAGGTTCAGGCCATTGGAAAAGTCAAGCATCCTAACATTGTGAAGTTGAGAGCTTATTATTGGGCTCATGATGAGAAGCTTTTGATCAGTGATTTCATCTCCAATGGCAATTTGGCTACTGCCCTTAGAGGGAGAAATGGACAATCATCTCCGAATCTTTCATGGTCAACCAGGCTGAGAATAGTCAAAGGAACAGCTAGGGGTTTGGCTTATCTCCATGAATGCAGTCCAAGAAAATTTGTTCATGGTGACATCAAACCCTCCAACATCCTCCTTGACACAGATTTCCAACCCCACATTTCTGATTTTGGTCTTAACCGGTTGATCAGCATCACTGGCAGCAACCCCTCCTCTGGTGGCATCATGGGTGGGGCTCTTCCTTACATGAAGTCATCACAAACAGAGAGAACTAACAACTATAAAGCCCCCGAGGCTCGAGTACCAGGGTGCAGACCCACCCAGAAATGGGATGTGTACTCATTTGGAGTTGTATTACTTGAATTGCTTACTGGGAAATCCCCTGATTCTTCTCCAGCAGCATCAACTTCAGTGGAAGTCCCTGACTTGGTGAGGTGGGTAAGGAAAGGGTTTGAACAAGAAAGCCCTTTATCTGAAATGGTTGATCCATCACTTCTCCAAGAAGTTCATGCTAAGAAAGAGGTACTAGCTGTGTTTCATGTAGCACTTTCATGCACTGAGGGAGACCCTGAGGTCCGGCCTAGAATGAAAACTGTCTCTGAAAATCTTGAAAGAATTGGATCATGA 2154 0.5042 MHVTLFFLLFFFYHVVSLSSDGLALLTLKSAVDGDGAAAFSDWNENDPTPCRWSGISCANISGEQDPRVVGVSLAGKGLRGYLPSELGNLLYLRRLSLHTNAFHGSIPVQLFNATALHSIFLHGNNLSGELPPSVCNLPHLQNLDLSDNSLAGDIPNSLGNCSQLQRLILARNNLAGEIPATPWPKLKNLVQLDLSSNVLSGPIPDQIGELSSLAGTLNLSFNHLSGRVPKSLGKLPVTVSFDLRNNDLSGEIPQTGSFSNQGPTAFLNNPNLCGFPLQKPCNGSAPSEPGSRSVSNREQANRSSKGLSPGLIILISVADAAGVALIGLVIVYVYWKKKDKSNGCSCTGKTKFGGGNNDKNSILCCFCGSLLPCVNGLKSDDSEVEEGEKGEGEGEGGRGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLRAYYWAHDEKLLISDFISNGNLATALRGRNGQSSPNLSWSTRLRIVKGTARGLAYLHECSPRKFVHGDIKPSNILLDTDFQPHISDFGLNRLISITGSNPSSGGIMGGALPYMKSSQTERTNNYKAPEARVPGCRPTQKWDVYSFGVVLLELLTGKSPDSSPAASTSVEVPDLVRWVRKGFEQESPLSEMVDPSLLQEVHAKKEVLAVFHVALSCTEGDPEVRPRMKTVSENLERIGS* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02027 717 SUPERFAMILY Protein kinase-like (PK-like) 425 712 IPR011009 -
Rops8g02027 717 SUPERFAMILY L domain-like 20 279 - -
Rops8g02027 717 MobiDBLite consensus disorder prediction 285 305 - -
Rops8g02027 717 Pfam Protein kinase domain 425 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02027 717 SMART serkin_6 424 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02027 717 MobiDBLite consensus disorder prediction 382 402 - -
Rops8g02027 717 Gene3D Phosphorylase Kinase; domain 1 408 495 - -
Rops8g02027 717 CDD STKc_IRAK 426 715 - -
Rops8g02027 717 Pfam Leucine rich repeat N-terminal domain 19 58 IPR013210 -
Rops8g02027 717 MobiDBLite consensus disorder prediction 282 305 - -
Rops8g02027 717 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 162 715 IPR046959 -
Rops8g02027 717 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 18 185 - -
Rops8g02027 717 Gene3D Ribonuclease Inhibitor 18 182 IPR032675 -
Rops8g02027 717 Gene3D Transferase(Phosphotransferase) domain 1 496 715 - -
Rops8g02027 717 FunFam Leucine-rich repeat receptor-like protein kinase 189 284 - -
Rops8g02027 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 496 717 - -
Rops8g02027 717 Gene3D Ribonuclease Inhibitor 183 284 IPR032675 -
Rops8g02027 717 FunFam Leucine-rich repeat receptor-like protein kinase 403 495 - -
Rops8g02027 717 ProSiteProfiles Protein kinase domain profile. 420 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02027 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02027 Rops-Chr8 47456642 47461602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02027 16 715 Receptor kinase-like Gene Family AT1G67510 70.629 0.0 993
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops8g02027 Pkinase 4.5e-33 CL0016
TF S1Fa-like Rops8g02027 Pkinase 4.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02027 - - gmx:100795021 1175.61