Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02005 ATGGATTGCCAAAAGATAGGAGCTCATGGGAAGTGGTGGCGCGTTTGGCTGCGGCAAGGCAAGAGTTTGAGGCACGGCAAAGATCTTGGTGGCACAAAGGAATCTTCCAAAGACCCAGAACTTGACCAATTCATGGAAGCTTACTACGACATGCTTGTGAAGTATAGAGAGGAATTAACAAGGCCTTTACAAGAGGCTATGGATTTCATGCGAAGGATAGAAACTCAGCTAAATATGCTTTGCAATGGACCCGCTCGGATCTTCTCTCGATGA 273 0.4652 MDCQKIGAHGKWWRVWLRQGKSLRHGKDLGGTKESSKDPELDQFMEAYYDMLVKYREELTRPLQEAMDFMRRIETQLNMLCNGPARIFSR* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02005 90 SMART KNOX2_2 31 82 IPR005541 GO:0003677|GO:0005634
Rops8g02005 90 Pfam KNOX2 domain 36 81 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02005 Rops-Chr8 46187870 46188142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02005 1 89 Homeobox Transcription Factor Family AT4G08150 57.143 1.75e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02005 - - vum:124822256 124.02