Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01981 ATGCAGCTTCATCAAGTGCTACGAGGATTATTCCCCGAGCTTGCTCCAGCTATTGGCATTGCGGTTGATCATCGCCACAAGAACCGTTCTTTGGAAAGTCTGCAAGCGAATGTGCAAAGGTTGAAAACATACAAGGCCAAGTTGGTTATGTTCGCAAGACGGGCACACAAGGTCGAGGCTGGTGATTCTAGTCCCGAGGAACTTGCAAATGCCACACAAGTTCAGGGTTCATATTTGCCCATTGTGAGGGAGAAGCCATCCGTTGAGCTTGTTAAGGTTACAGATGAAATGAAGGTATTTAAAGTATATTATAAGCTTTGTCTTGAACGCACCAACAAACGCCATTTTGGTGCCAGACTAAAGAGAGCCGCTGAAGAAGGAAAAGAAGTGATGACCTCGAGAAGCCTGTATACAACCCCATGA 423 0.4586 MQLHQVLRGLFPELAPAIGIAVDHRHKNRSLESLQANVQRLKTYKAKLVMFARRAHKVEAGDSSPEELANATQVQGSYLPIVREKPSVELVKVTDEMKVFKVYYKLCLERTNKRHFGARLKRAAEEGKEVMTSRSLYTTP* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01981 140 FunFam 60S ribosomal protein L13 91 130 - -
Rops8g01981 140 Gene3D - 92 132 - -
Rops8g01981 140 Pfam Ribosomal protein L13e 9 110 IPR001380 GO:0003735|GO:0005840|GO:0006412
Rops8g01981 140 PANTHER 60S RIBOSOMAL PROTEIN L13 10 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01981 Rops-Chr8 45376090 45376512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01981 9 117 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 76.147 7.24e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01981 K02873 - gmx:100305489 197.978