Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01940 ATGACTGATGCAAATGTTGCTGAATTTGAGGCATTTCTCCAAGGGTGGATGGTGCGTCAAAGAGGCTTCCTTGATGAGCTTCTCTCAGCTCAGCAACACCATCATGAGTTGCCGGATGCTGATAGGAGGCAATTGGCAAACAGGATAATCTGCCACTATGGTCAATACTATGAAGAGAAATCAAGGATGGCACACCACAATATTCTGCTTGTTTTCTCACCACCATGGTTCAGTTCATTGGAAAGAACCTTTTTTTGGGTGGCGGGGTTCAAGCCAGGGATGGCATTTCAGGTTGTGAACACAGCTTTGGAGGACTTGTCAGAAGAACAAAGGCAAAGGTTGAGCCAGCTGAACCAAGAGACCAAGATGAAGGAGAGAGCACTCAATGATGAGTTGGCTAAGGTTCATGAGAGTACGGCCGGGCCACCGCTTGTGGACAAGGCCAGAAGCCATGGTAGGTTGTGTTTGAGTAGGTCTTTCATGGCAGAGGAAGGCGCAGTTCCCAGTACTTTCAAGGAGACATTGGAGAATCTTGTGGCAAATGCAGATGAGTTGAGGACAAACACAGCTTTAAAAATTGTGCAGATTCTGAGACCAGCTCAGGTTGTCAACTTCTTGGTCGCTGTAGCTGAGCTTCAACTTAGGATCAGGTCTTGGGGTTTGGATAAGGATGCACATAATGGAAGCCAAGGGTGA 696 0.4727 MTDANVAEFEAFLQGWMVRQRGFLDELLSAQQHHHELPDADRRQLANRIICHYGQYYEEKSRMAHHNILLVFSPPWFSSLERTFFWVAGFKPGMAFQVVNTALEDLSEEQRQRLSQLNQETKMKERALNDELAKVHESTAGPPLVDKARSHGRLCLSRSFMAEEGAVPSTFKETLENLVANADELRTNTALKIVQILRPAQVVNFLVAVAELQLRIRSWGLDKDAHNGSQG* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01940 231 Coils Coil 100 127 - -
Rops8g01940 231 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
Rops8g01940 231 ProSiteProfiles DOG1 domain profile. 6 226 IPR025422 GO:0006351|GO:0043565
Rops8g01940 231 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01940 Rops-Chr8 44197099 44198926 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01940 3 218 Calmodulin-binding Proteins AT1G77920 27.027 5.84e-19 82.8