Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01933 ATGGCTAAACCAGAAAATGCAAAACCTGGGTGTTTCTCTGACTTCTTTCATTTACTTTGTGTTAGGAATGGAAATAGTCCTCCAATGCTTCCTTCTGATCACATTACAGAATCATGTGAAACAAAACTAGTGCATCCAAATAAGGATGCAATGACCAATGTAGATAAACCAGGAGTGGTGGCAAGGCTAATGGGGCTTGATTCACTCCCAAATACCAACTTGGCATCAAAAGGAAGTACCCCAGATTTAGTTCCAAGAAGTAGGTCAGTGAATTTTGTGGATTACTTGCTGAAGTTTGATGTAAACCAAGCCAACCATCGCCGAGTGAAAACCTCAGCATCATTCAGAGAGGTTCCTGCTCCTTTTCAGCAACAAAATAATGATCTTCTTATGCTCTATTGGGGTAGTGGGAGTGAAGATCACAAAGTTGGATCCAATTTGAGGAAACAAGAAATGGGGTTGGGAGAATCAAGACAGAGGAAGAAGCAAGGGAGCAAGAACAAGGAGATTGTAAGAGAGAGGAGTAATATGACAAAGGAGAGGAAGAATCAAGGAAAGAACAAGAAAATTTCTAAGTTCAAGAATGAGCCCATAATGGTCCCAGTTAAGCATAGTTCAAAGGTTGGAAATCACAATGAAGCTAAAGTTTTGACATCTGTTTCAACAAGCTCCAAGAATTGTAGTAACAGAAAAGGTGGTACTGGTTCAAGATCAAGCTCTAAATTGCCAAATAAGCAGAACAAAGTGTTCTCTGAACAAAAACAGACCAAAAATATAAGGAAACAACAATCACCAAAGAAGATAGAGACTGAATATAGCTCAGAAAATTTCAGTCCAGTTTCAGTTCTAGACGACCATGACTATGCATTTCTTTATGGACCTGATTTTCTAGATTACGTAAGCCCCGTGATATCTAAGTCAAAGTGGGAATTTTCAGAACTATCATTCTTGGATGGCAGTGTTGAAGACAGAGCAAGCAAGAATAAAGGCTATGCCTACCCTGACAACAGCAGGGAAAAAGAGTATTTATCAGAATTGATTCTGAAGGTTGGCACATTAATAGAAGATGATATTAGAGAATTAGATTGTAAGCAAAAGCATATTTATGAGAGTGAGAGTTTTGAGGAAATTTGTTTGGTGTATGAGAGTAAAATTTTTGACATTTTACTACACGAGGTTGTCAATGAACTTGTAGAACTTTCATATTGA 1209 0.3797 MAKPENAKPGCFSDFFHLLCVRNGNSPPMLPSDHITESCETKLVHPNKDAMTNVDKPGVVARLMGLDSLPNTNLASKGSTPDLVPRSRSVNFVDYLLKFDVNQANHRRVKTSASFREVPAPFQQQNNDLLMLYWGSGSEDHKVGSNLRKQEMGLGESRQRKKQGSKNKEIVRERSNMTKERKNQGKNKKISKFKNEPIMVPVKHSSKVGNHNEAKVLTSVSTSSKNCSNRKGGTGSRSSSKLPNKQNKVFSEQKQTKNIRKQQSPKKIETEYSSENFSPVSVLDDHDYAFLYGPDFLDYVSPVISKSKWEFSELSFLDGSVEDRASKNKGYAYPDNSREKEYLSELILKVGTLIEDDIRELDCKQKHIYESESFEEICLVYESKIFDILLHEVVNELVELSY* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01933 402 MobiDBLite consensus disorder prediction 211 258 - -
Rops8g01933 402 MobiDBLite consensus disorder prediction 150 193 - -
Rops8g01933 402 Pfam DUF761-associated sequence motif 57 73 IPR032795 -
Rops8g01933 402 MobiDBLite consensus disorder prediction 150 272 - -
Rops8g01933 402 PANTHER OS05G0128300 PROTEIN 1 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01933 Rops-Chr8 44108856 44111123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01933 1 397 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 27.293 3.36e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01933 - - gmx:100775965 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01933 8 44108856 44111123 Rops8g01933 8 44108856 44111123 ECH