Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01932 ATGGAGGGTCATCATCTCCATCAACATCACCATCATCATCAACGGCAACAACAACAACAACATCAACAACACCCTTCTCATAACATCATCACTAGTGTTAACGTGGATGCAACTGATAGGTTCCCTCAATGGAGCATCCAAGAGACAAAGGAGTTCCTCATGATCCGTGCAGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAACAGCTTTGGGAAGTTATCTCCAACCGGATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTATAAGGGATGTGAAACGATGGAAGCAGAAGCTTTGAGGCAACAATTTCCATTTTACAATGAGCTTCAAGCGATTTTCACTGCGAGGATGCAGAGAATGTTGTGGGCTGAAGCAGAAGGAGGGTCCAAGAAGAAGGGGGTGCAGCTTTCATCGGAGGACGAAGAAGATGGCAATGAAGAGAGTGAGGGAGATCACAAGGGTAGCATCAGAAAGAAGAAAAAGGGTAAGATGGTTAGTGGAGGAGGAAGTGGTAGTGTTAGTGGTGGCGGTAGTAGTTTGAAGGAGATGCTTGAAGAGTTCATGAGGCAACAAATACAAATGGAAGCTCAATGGATGGAAGCATTTGAGGCAAGGGAGAGTGAGAGAAGGTTGAAGGAGATGGAATGGAGACAAACCATGGAAGCATTGGAGAATGAGAGGATAATGATGGATCAGAGATGGAGAGAGAGGGAAGAGCAAAGAAGGATCAGAGAAGAAGCTAGGGCTGACAAGAGAGATGCTCTAATCACAGCACTTCTCAACAAGCTCAGAAGGGAAGAGATGTAG 852 0.4577 MEGHHLHQHHHHHQRQQQQQHQQHPSHNIITSVNVDATDRFPQWSIQETKEFLMIRAELDQTFMETKRNKQLWEVISNRMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEAEALRQQFPFYNELQAIFTARMQRMLWAEAEGGSKKKGVQLSSEDEEDGNEESEGDHKGSIRKKKKGKMVSGGGSGSVSGGGSSLKEMLEEFMRQQIQMEAQWMEAFEARESERRLKEMEWRQTMEALENERIMMDQRWREREEQRRIREEARADKRDALITALLNKLRREEM* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01932 283 CDD GT1 42 107 - -
Rops8g01932 283 Pfam Myb/SANT-like DNA-binding domain 43 127 IPR044822 -
Rops8g01932 283 Gene3D - 44 105 - -
Rops8g01932 283 MobiDBLite consensus disorder prediction 1 18 - -
Rops8g01932 283 PANTHER FI21293P1 12 279 - -
Rops8g01932 283 ProSiteProfiles Myb-like domain profile. 44 100 IPR001005 -
Rops8g01932 283 MobiDBLite consensus disorder prediction 1 25 - -
Rops8g01932 283 FunFam Zinc finger and SCAN domain-containing 20 44 105 - -
Rops8g01932 283 MobiDBLite consensus disorder prediction 145 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01932 Rops-Chr8 44057274 44058627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01932 39 281 Trihelix Transcription Factor Family AT5G01380 54.275 1.65e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops8g01932 Myb_DNA-bind_4 4.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01932 - - gmx:100778195 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01932 8 44057274 44058627 Rops8g01932 8 44057274 44058627 ECH