Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01918 ATGGTACACATAATTGGGCATGTTGTTGCAACTGTGAGCATGTCCAAAGTTGTAGTTTCATTCATTCACATCTTCAAGAGTGAAGAGCTTGCTTTCAGTGTCCTGGTATCAAGGTTCTTGCTTGGAGAAGCATTCCCTATGCTGGTTTACCTTTCACTAGTGCCAATTATTGGTGGTTGTGCACAAGCTGCTGTGACAAAGCTCAATTTCAAAATGATTGGGTCCCAAGGAGTGAGCTGCAGGGTGGCAAACAACTATGTCTCAGATTGA 270 0.4333 MVHIIGHVVATVSMSKVVVSFIHIFKSEELAFSVLVSRFLLGEAFPMLVYLSLVPIIGGCAQAAVTKLNFKMIGSQGVSCRVANNYVSD* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01918 89 Pfam Triose-phosphate Transporter family 1 74 IPR004853 -
Rops8g01918 89 PANTHER SOLUTE CARRIER FAMILY 35 2 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01918 Rops-Chr8 43765725 43766282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01918 3 77 Antiporters AT5G54800 74.667 2.41e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01918 K15283 K05350 gmx:100790658 115.546