Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01863 ATGACCCACGGTAGTCCACACCAGATCGCGGCAGAGGCCACCTCGCGCCAGCCAGCTCTCTCTCGGCCAGACCACCTCACGCCGCTGCACCACCTCGCTCCGGCAAGTTCTGCACCACCTCGCGCCGGCCAGATTTTTGCACCTCCAAGATTTCGTTTGCTCTGGTTAGGTAGAAGGATTATAGTTGCTGTGGACTTGAATGCCTTGCCTGTGCCGGAGGAAGATGAAGATGCTTTTGAGGGCCAGGTCGAAGAGTATAATGCGCCAGAAGAGCGCATGGAAAGTGCAGTTGATATAGCACGTCGGGAACGTGAAGAAAGAAAGAAACGGTTGAAGAGAGAACGTTCAGATGACAGACCTGTGCAAGTATCACAGTCACCCATGCATGATCAGCTATTTCATACTAAGATCATTAAATCATATGATAGAAGTAAGCTTCCTCCAGGTTGGTTGGATTGCCCTTCGTTTGGCCAGGAAATTTTTGGCATGATCCCTTCTAAGGTTCCACTTGGTGAATCATTCAATGACTACATTGCTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTGGTGATTGATTTGACGAATACTTCTCGATACTATCCAGTATCAGATCTGAGGAATGAGGGAATCAAGCATGTTAAGATTCAATGCAAGGGCCGCGACTCTGTACCTGATAATTTTTCTGTTAATCATTTTGTCTATGAGGTCATGCAATTTCTATCACGTCAAAAACACTCAAAGAAGTACATACTTGTTCATTGTACACATGGTCATAACCGTACAGGATACATGATCATCCATTATCTGATGCGTACAATGTCAATGTCTGTTACTCAGGCAATAAAAATATTTTCTGATGCACGCCCTCCAGGGATCTATAAACCTGAGTATATTGATTCATTATACACATTTTATCATGAAAAAAAACCTGAAATGATAGTTTGTCCTCCTACTCCCGAGTGGAAGAGAACTCCTGAACTAGTTGATCTCAATGGTGAAGCAGTGCCAGATGATGATGATGATTATGGAGTACCGGGCCCTCCTTTGAATGAGAATCACGAGACTGACACAATCATGACAAATGACGATGTTTTGGGAGATGAGATACCTAACGATCAGCAAGATGCATTACGACAGTTCTGCTTTCAAACACTCAAATTGGGTGTTGGGGCCAGAGGACACATGCAATTTCCAGGGTCACACCCAGTTTCATTGAACAGGGATAATTTACAACTGTTACGACAGCGTTATTACTATGCAACATGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATAGATGGATGTTACTTGATTGATAGAAGCTTCAATTTCCGAAGGGTTCAAATGAGGTTTCCTTGCAGGGTTACAAATGATGGCTTGACTGAGAAGACCCACCACTTCACATTACTTGATGGGGAGATGATCATTGATACATTGCCAGATTCAAAAAAGCAGGAAAGGAGATACCTCATATATGATCTGATAGCAGTCAACCAAGTATCAGTAATAGAGCGACCTTTCTCTGAACGGTGGAAGATGCTTGAGAAAGAAATAATTGAACCCAGGAATCAGGAACGATACCACAGCAAAAATCTTTATTATAGATATGACATGGAGCCATTCAGGGTGAGGAGGAAAGACTTTTGGCCGCTCTCTACTGTGACAAAACTTTTAAACGAATTCATTCCGAAACTCTCACATGACGCAGATGGTCTCATATTTCAGGGTTGGGACGATCCTTATGTACCGCGCACTCATGAAGGTCTCTTAAAGTGGAAATATGCTGAGCTTAATTCAGTTGATTTTCTCTTTGAGATTGATGATGATCGTGAGCTACTTTTTCTCTATGAACGAGGAAAGAAGAAACTCATGGAAGGGTATAGAGTTGCATTCGAAGATGGTTCAGACCCCTTGCTTTATTCCGGAAAGATCATTGAGTGTTCCTGGGATTCCGATAAACAGGAATGGATATTCAAACGAATCAGAACAGATAAGGCAACTCCAAATGACTTCAATACTTACAAGAAGGTGATGCGAAGTATAAGAGACAATATCACGGAGGATATCCTGTTGAATGAAATAAATGAGATAATCCGCCTTCCCATGTACGCCGACAGGATAAGAATCGATAGCAAAGCTCATCAGCACACTAACATGGCTAGGCGAAGGTGA 2220 0.4248 MTHGSPHQIAAEATSRQPALSRPDHLTPLHHLAPASSAPPRAGQIFAPPRFRLLWLGRRIIVAVDLNALPVPEEDEDAFEGQVEEYNAPEERMESAVDIARREREERKKRLKRERSDDRPVQVSQSPMHDQLFHTKIIKSYDRSKLPPGWLDCPSFGQEIFGMIPSKVPLGESFNDYIAPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLRNEGIKHVKIQCKGRDSVPDNFSVNHFVYEVMQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRTMSMSVTQAIKIFSDARPPGIYKPEYIDSLYTFYHEKKPEMIVCPPTPEWKRTPELVDLNGEAVPDDDDDYGVPGPPLNENHETDTIMTNDDVLGDEIPNDQQDALRQFCFQTLKLGVGARGHMQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRSFNFRRVQMRFPCRVTNDGLTEKTHHFTLLDGEMIIDTLPDSKKQERRYLIYDLIAVNQVSVIERPFSERWKMLEKEIIEPRNQERYHSKNLYYRYDMEPFRVRRKDFWPLSTVTKLLNEFIPKLSHDADGLIFQGWDDPYVPRTHEGLLKWKYAELNSVDFLFEIDDDRELLFLYERGKKKLMEGYRVAFEDGSDPLLYSGKIIECSWDSDKQEWIFKRIRTDKATPNDFNTYKKVMRSIRDNITEDILLNEINEIIRLPMYADRIRIDSKAHQHTNMARRR* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01863 739 MobiDBLite consensus disorder prediction 1 15 - -
Rops8g01863 739 Gene3D Protein tyrosine phosphatase superfamily 122 339 IPR029021 -
Rops8g01863 739 Gene3D - 650 716 IPR012340 -
Rops8g01863 739 Gene3D DNA ligase/mRNA capping enzyme 373 609 - -
Rops8g01863 739 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 243 312 IPR000387 GO:0016311|GO:0016791
Rops8g01863 739 ProSiteProfiles Dual specificity protein phosphatase domain profile. 168 324 IPR020422 GO:0006470|GO:0008138
Rops8g01863 739 FunFam mRNA-capping enzyme 631 724 - -
Rops8g01863 739 Pfam mRNA capping enzyme, catalytic domain 414 609 IPR001339 GO:0004484|GO:0005524|GO:0006370
Rops8g01863 739 PIRSF mRNA_capping_HCE 132 739 IPR017074 GO:0004484|GO:0006370|GO:0140818
Rops8g01863 739 ProSiteProfiles ATP-dependent DNA ligase family profile. 496 637 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Rops8g01863 739 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 145 335 IPR029021 -
Rops8g01863 739 SMART dsp_5 180 320 IPR020422 GO:0006470|GO:0008138
Rops8g01863 739 FunFam mRNA capping enzyme family protein 142 357 - -
Rops8g01863 739 CDD Adenylation_mRNA_capping 385 610 IPR001339 GO:0004484|GO:0005524|GO:0006370
Rops8g01863 739 Pfam mRNA capping enzyme, C-terminal domain 614 706 IPR013846 -
Rops8g01863 739 Pfam Dual specificity phosphatase, catalytic domain 198 318 IPR000340 GO:0008138|GO:0016311
Rops8g01863 739 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 374 610 - -
Rops8g01863 739 Coils Coil 97 117 - -
Rops8g01863 739 MobiDBLite consensus disorder prediction 1 42 - -
Rops8g01863 739 MobiDBLite consensus disorder prediction 87 126 - -
Rops8g01863 739 SUPERFAMILY Nucleic acid-binding proteins 612 723 IPR012340 -
Rops8g01863 739 ProSitePatterns Tyrosine specific protein phosphatases active site. 265 275 IPR016130 GO:0016311|GO:0016791
Rops8g01863 739 FunFam mRNA capping enzyme, putative 373 607 - -
Rops8g01863 739 PANTHER MRNA-CAPPING ENZYME 141 721 - -
Rops8g01863 739 CDD RNA_5'-triphosphatase 149 315 - -
Rops8g01863 739 MobiDBLite consensus disorder prediction 87 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01863 Rops-Chr8 42377497 42401454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01863 60 739 Protein tyrosine phosphatase (PTP) family AT3G09100 67.445 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01863 K13917 - gmx:100803597 1248.42