Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01855 ATGCATTCGATTTTTGGAGCGTTTGTTTTTGGGTTAACAATACCAAGAGGTAGTGAATTTGCAAGCAGGGTTACGAAGAGGATTAAGGATTTTGTGTCCACGTTGTTGCTTCCTTTGTACTTTGCATCAAGTAGGTTGAAAACTGATGTGGCTAAGTTGCAGAGTGTGATGGAATGGGGGTTTCTTTTGCTTGTTATATCGACGGCTTGTGTGGGGGAGATTTTGGGAACGTTTGCAGTGGCGGTGATGAGCACGATTCCGGTGAGGGAGTCCTTGACGCTTGGGTTGTTGATAAACACTAAAGGGTTGGTGGAGCTTATTGTTCTCAATATTGGCAAGGAAAAGAAGGTTCCATCCCGTGCAACTTATATAATATACATTTGCTTGTCTTCACTGGTGTCAAAGGTTACCACCAAATTTTTGTCCGTACCTTCTATATTATAA 444 0.4212 MHSIFGAFVFGLTIPRGSEFASRVTKRIKDFVSTLLLPLYFASSRLKTDVAKLQSVMEWGFLLLVISTACVGEILGTFAVAVMSTIPVRESLTLGLLINTKGLVELIVLNIGKEKKVPSRATYIIYICLSSLVSKVTTKFLSVPSIL* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01855 147 Gene3D - 1 145 IPR038770 -
Rops8g01855 147 PANTHER CATION/H + ANTIPORTER 1 140 - -
Rops8g01855 147 Pfam Sodium/hydrogen exchanger family 2 136 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01855 Rops-Chr8 42265802 42266245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01855 1 147 Antiporter Super Family AT3G53720 59.864 1.87e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01855 K26731 - gmx:100799165 188.734