Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01829 ATGACTGGTTCTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAAAAGGAAGTGTGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGTCATGAACAAGGTGCTACCTATTTTCCAGCCGTTCATAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCCCATCTCCCTGTGAGTGATCGTTGTGAAGCTGCAATAACTATCTCATATGAAGCTCAAGCTAGACTTCAGGATCCAATTTATGGCTGTGTTGCCCATATTTTTGTACTCCAACAACAGGTGGTCAATTTACAAGCTCAACTAGCTTATCTCAGGGAACAAGCAACTCAAAGATGTCTCAATGCCTCAACTGCTGAAAACCCTAATGAGAAATACTTTGAAAAACCTAATACTTTCCCCCAAGATCTTCCAAGTTGGTTCCAGATGGAAAATTCCAACATGGGTCCTCGATTTCTTCCACCAAACTTGACCACTAATCCCTCAACATTACAATATTATGGGAATATTACTCCCATAGATCCAAACCCTATTGGAAATTATGAAAATTCAGGCATGGGTCCTCAATTTCTTCCACCAAACTTGACCATTAATCCCTCAACATTACAATATTATGGGAATATTACTCCCATAGATCCAAACCCTATTGGAAATTATGAAAATTCAGGCATGGGTCCTCAATTTCTTCCACCAAACTTGACCACTAATCCCTCAACATTACAATATTATGGGAATATTACTCCCATGGATCCAAACCCTATTGGAAATTATGAAAATCTAGGAACCATGGAAGATAGGATCTCATTTTCTAGATTTGAAGAGAGTTGTAACTCCATGTCTTGTGACATGCAAAGGCAGTGGTCCTTTCATGAAATGTGCCTTCAGTAA 885 0.3977 MTGSGSPCGACKFLKRKCVRGCVFAPYFCHEQGATYFPAVHKVFGASNVSKLLAHLPVSDRCEAAITISYEAQARLQDPIYGCVAHIFVLQQQVVNLQAQLAYLREQATQRCLNASTAENPNEKYFEKPNTFPQDLPSWFQMENSNMGPRFLPPNLTTNPSTLQYYGNITPIDPNPIGNYENSGMGPQFLPPNLTINPSTLQYYGNITPIDPNPIGNYENSGMGPQFLPPNLTTNPSTLQYYGNITPMDPNPIGNYENLGTMEDRISFSRFEESCNSMSCDMQRQWSFHEMCLQ* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01829 294 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Rops8g01829 294 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 132 - -
Rops8g01829 294 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01829 Rops-Chr8 41558226 41559214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01829 7 125 AS2 family AT3G58190 76.860 1.64e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Rops8g01829 LOB 4.5e-34 No_clan