Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01820 ATGTTCTTAACCGCCACCGCAGACGACGTTCCGGCGCCGTACAACTCCACGGTGGCGACAAGGCTGGGGCGGCGGAGGATTCCGATACACACGACTTTCTATTGGGGTCACAAGGTGGACATAATTTTCGGGTGCTGGCCCGGCGACAGCGCCGCCATGTACGCGGTGGCGCTGCTCCTTGTGTTCGCCGTGGCGGTGCTGGTGGAGTGGCTATCGTTCACTAACATCGTGAAGCTTAAGCCAGGGGGCTCAAACGACGTCGTTGGGGCACTCCTGAGAACGGGGCTATACGGCGTGCGTTCTGGGCTTTCTTATTTGGTCATGCTGGCCGTCATGTCGTTTAATGGTGGCGTGTTTCTCGCCGCAATTGGTGGCCACGTCATCGGGTTCTTGATTTTCGGTACGCGGGCTATTCGGAAGAAAACGGGTGGGTTCGATTCTTCGAAACCGTAG 453 0.5784 MFLTATADDVPAPYNSTVATRLGRRRIPIHTTFYWGHKVDIIFGCWPGDSAAMYAVALLLVFAVAVLVEWLSFTNIVKLKPGGSNDVVGALLRTGLYGVRSGLSYLVMLAVMSFNGGVFLAAIGGHVIGFLIFGTRAIRKKTGGFDSSKP* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01820 150 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 29 139 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops8g01820 150 Pfam Ctr copper transporter family 91 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01820 Rops-Chr8 41122721 41123173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01820 32 142 Inorganic Solute Cotransporters AT5G59030 46.847 3.48e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01820 K14686 - gmx:100803410 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01820 8 41122721 41123173 Rops8g01820 8 41122721 41123173 ECH