Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01819 ATGAACATGCCTCAAGGTCAAGACATGATGAACATGCCCATGTCTAATGGCACAAACAACATGATGATGCAGATGCAGATGAGCTTCTACTGGGGCAAAAATGCCATAGTGCTTTTCTCTGGGTGGCCTAACAACAGTGTTGGCATGTATATCTTAGCTATATTGTTTGTGTTCTTCTTAGCCATGGCTGCTGAGGTTTTGTCTAACAAGCCAGTCATCACGAGTGGGACTAGTCCACTCATGGGAGCTCTGACTCAAACTTGTGTCCACTTCTTTCACATTGGTTTGATTTACTTGGTGATGCTTGCTGTTATGTCCTTCAACGTGGGAATCTTTATAGCTGCTGTGGCTGGCCATTCCTTTGGATTCTTCATTGCCAGGTCTCGTACTATTGCCACTGCCAGCAAGGAACATCAAGGGTCTGATAGTATTTAA 435 0.4437 MNMPQGQDMMNMPMSNGTNNMMMQMQMSFYWGKNAIVLFSGWPNNSVGMYILAILFVFFLAMAAEVLSNKPVITSGTSPLMGALTQTCVHFFHIGLIYLVMLAVMSFNVGIFIAAVAGHSFGFFIARSRTIATASKEHQGSDSI* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01819 144 Pfam Ctr copper transporter family 27 68 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops8g01819 144 Pfam Ctr copper transporter family 79 125 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops8g01819 144 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 18 138 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01819 Rops-Chr8 41118250 41118684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01819 29 142 Inorganic Solute Cotransporters AT3G46900 47.826 4.85e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01819 K14686 - gmx:100527849 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01819 8 41118250 41118684 Rops8g01819 8 41118250 41118684 ECH