Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01810 ATGAGATCTGAAGGAGGAGACGGCGGCGGCCTCGCGTGGGGAGGAGACGGGCTGGCTGGCGGCGGCCTCGCGAGGGGGTGGAGGAGAAGGGCTGGCTGGCGGCCTCACCTTGCGCAGGGGAGGAGAAGGATCGTGGCTACTGCATCGAAAGCTGTTTTTACTGCTGATGAGAAAGAGCGTGAGAAGAATGTTGAAGAATCACATGAGGCTCTGCAGTTTCTTGAGAATGAGCTGAAGGACAAGTTCTTTGGGGGAGAGGAGTTTGGCTTTGTGGATATTACTGCTGTCTTCATAGCATTTTTGGGTACCCATAATTCAAGAAATAGCAGGGCTGCAGTTGTTTACTAG 348 0.5374 MRSEGGDGGGLAWGGDGLAGGGLARGWRRRAGWRPHLAQGRRRIVATASKAVFTADEKEREKNVEESHEALQFLENELKDKFFGGEEFGFVDITAVFIAFLGTHNSRNSRAAVVY* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01810 115 Gene3D - 29 107 - -
Rops8g01810 115 Pfam Glutathione S-transferase, C-terminal domain 54 100 IPR004046 -
Rops8g01810 115 SUPERFAMILY GST C-terminal domain-like 46 96 IPR036282 -
Rops8g01810 115 Coils Coil 57 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01810 Rops-Chr8 40868552 40869757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01810 45 100 Glutathione S-transferase Gene Family AT3G09270 54.386 5.21e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01810 K00799 - gmx:100527851 87.4261