Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01809 ATGCTTTTGCTTAAAAGAGCCTTGGATCGTTTCTGGTCCAAGTTCATAGATGACAAGATCGTGGCTGCTACATGGAAAGCTGTTTTCACCGTTGATGAGAAAGAGCGTGAGAAGGGTGTTGAGGAATCACATGAGGCTCTGCAGTTTCTTGAGAATGAGCTCAAGGACAAGTTCTTTGGGGGAGAGGACTTTGGTTTTGTGGATATTGCTGCTGTCTTCATAGCCTTTTGGATCCCTATTGTTCAAGAAGCAACAGGGTTGCAGTTGTTCCCCAGTGAGAAATTTCCCAAGCTCTACAAATGGAGTCAAGAGTTTATCAACCACCCAATTGTCAAAGAAAACTTGCCTCCTAGAGACCCACTTTTTGCCTTCTTCAAAGCTCGATATGAAAGCCTTGCTGCTTCAAAATAG 411 0.438 MLLLKRALDRFWSKFIDDKIVAATWKAVFTVDEKEREKGVEESHEALQFLENELKDKFFGGEDFGFVDIAAVFIAFWIPIVQEATGLQLFPSEKFPKLYKWSQEFINHPIVKENLPPRDPLFAFFKARYESLAASK* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01809 136 Gene3D - 4 136 - -
Rops8g01809 136 CDD GST_C_Tau 6 128 IPR045074 GO:0004364|GO:0006749
Rops8g01809 136 SUPERFAMILY GST C-terminal domain-like 4 130 IPR036282 -
Rops8g01809 136 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 119 IPR045073 -
Rops8g01809 136 FunFam Tau class glutathione S-transferase 4 135 - -
Rops8g01809 136 Pfam Glutathione S-transferase, C-terminal domain 16 109 IPR004046 -
Rops8g01809 136 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 2 124 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01809 Rops-Chr8 40853015 40858020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01809 5 135 Glutathione S-transferase Gene Family AT3G09270 48.485 1.89e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01809 K00799 - gmx:100500680 218.779