Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01776 ATGTTGTTGCTATCATGCGCCGTGGAAGCGCGACAGTGCGGGAACTGCGGCCTGAACCCGATTCCGTACCCATTAAGCACGGGACCCGACTGCGGTGACCCGTGGTACAAGATCCGGTGCACCGCAGGCACATTGTGGTTGGATGCACTTGCAGGATCATCCTACATGATAAGGTCCATCGACTCGTTAACCCGTCGAATCATAACCCGACCCGCCACGCTAGCAGGAAGCGCGTGCGTGTCCAAGGACTTCCACAGCGAAGGTATGCACCTGAATGAGACCCTTCCTTTTAGCGTGGCCGCGGGAAACACCGTTTTCCTATTCAACTGCACCATCAATATTCCTCACGCGCCGCCGATGGATTGCTCGGCAAGTAGCCTGTGCCACAGCTACATCAAGGACCACATGGATGCAGGCGCGTGTGGCCGCGTGAAAGTGTGCTGCGTTTATAAAACTGGTGGGACCCTCAAAGAGTATGTGGTTCGGGTTCACGGTGGTGGTTGTGCGGCGTATCAGAGTTTTGTGGATTTGAATGGGACGGTGGCGACGAGGTGGCCGGAGCCAGGAGTGAGGATAGAGTGGGTGGCACCAGAGGAACCGGTTTGTAAGGAACCAATGGATTGCAAGGAATTGTTGAACTCTAAATGTGGAGTGGGCCCAGGTGGTGGTGGGGTGCAAAGGTGCTTCTGCATTGCTGGCTTTAAGTGGGACCCTATTAAGGGACTGTGTCAACCTCAGATTCCAAATACAAAGTGCGTAGGACATGGGAAAGGCAGCCACTGCAAAGTTCGGAAGAAAAAGAAAATGCTTCTGGTTGCAGTGGCTGTTTCCTTAGGAGGAACAGTCTCTATTGTGACAGTAATTGGAGTCATTCTCTACAAGAAGCATAACCAAGTAGAGAGAAAAGAAAAGAAGACCCTAACCAAAAGGAAAAAAGATATCTCAAGTGCTACAGCTTGTGCTTTATCATCCAGGATCTTCACAGGCAGAGAACTAAGAAAAGCAACCAACAACTTCTCCCAAGAAAAGCTCATTGGCACTGGTGGTTTTGGTGAAGTGTTCAAGGGAACTTTTGATGATGGAACTGTCACTGCCATCAAGCGTGCCAAGCTTGGAAACACAAAAGGCATTGATCAAATGCAAAATGAGGTTCGAATTCTCTACCAAGTTAACCATAGGAGCCTAGTGAGACTCCTTGGTTATTGCTTAGAGCTTGAGCACCCTCTACTAATATATGAGTATGTTTCTAATGGGTCACTTTTTGATTACCTTCATCACCAACCTTTAAGCACAAGGGCACCCCTCAAATGGCATCACAGACTCAAAATTGCACACCAAACTGCTGAAGGGCTTTCTTATCTTCATTCTGCTGCTGTGCCTCCCATTTACCACCGTGATGTGAAATCAAGCAATATTTTACTTGATGACAAGCTTGATGCCAAAGTTTCTGACTTTGGATTATCTAGGCTTGTTGAATTAGCTGAACAAAATAAGAGCCATATTTTCACTAGTGCACAGGGAACACTTGGTTATCTTGACCCTGAATACTACCGTAACTTTCAACTCACAGATAAGAGTGATGTTTACAGTTTTGGGGTGGTGTTAATGGAGCTACTCACTGCTCAGAAAGCTATTGATTTTAACAGAGAAGAAGAGAATGTGAACTTGGCAGAGTATGCCAAGAAGAAAATGATTGAAGACAGGTTGATGGATGTTGTTGATCCATTTCTAAAAGAGGGAGCTAGCGATTTGGAATTGGAAACTATGAAATCATTGGGTTATCTTGCAGCTTCATGCTTGGATGAGCAGAGGCAAAAACGGCCTTCAATGAAAGAAGTTTCAGATGAGATTGAATACCTAATTAAAATTGTTAAAGGTCAGGTTTCTAAACCGTAA 1896 0.462 MLLLSCAVEARQCGNCGLNPIPYPLSTGPDCGDPWYKIRCTAGTLWLDALAGSSYMIRSIDSLTRRIITRPATLAGSACVSKDFHSEGMHLNETLPFSVAAGNTVFLFNCTINIPHAPPMDCSASSLCHSYIKDHMDAGACGRVKVCCVYKTGGTLKEYVVRVHGGGCAAYQSFVDLNGTVATRWPEPGVRIEWVAPEEPVCKEPMDCKELLNSKCGVGPGGGGVQRCFCIAGFKWDPIKGLCQPQIPNTKCVGHGKGSHCKVRKKKKMLLVAVAVSLGGTVSIVTVIGVILYKKHNQVERKEKKTLTKRKKDISSATACALSSRIFTGRELRKATNNFSQEKLIGTGGFGEVFKGTFDDGTVTAIKRAKLGNTKGIDQMQNEVRILYQVNHRSLVRLLGYCLELEHPLLIYEYVSNGSLFDYLHHQPLSTRAPLKWHHRLKIAHQTAEGLSYLHSAAVPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVELAEQNKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEENVNLAEYAKKKMIEDRLMDVVDPFLKEGASDLELETMKSLGYLAASCLDEQRQKRPSMKEVSDEIEYLIKIVKGQVSKP* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01776 631 CDD STKc_IRAK 345 618 - -
Rops8g01776 631 FunFam Wall-associated receptor kinase-like 20 415 630 - -
Rops8g01776 631 Gene3D Phosphorylase Kinase; domain 1 296 414 - -
Rops8g01776 631 ProSiteProfiles Protein kinase domain profile. 339 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01776 631 FunFam receptor-like protein kinase FERONIA 300 414 - -
Rops8g01776 631 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Rops8g01776 631 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 11 620 IPR045274 GO:0007166
Rops8g01776 631 SUPERFAMILY Protein kinase-like (PK-like) 313 615 IPR011009 -
Rops8g01776 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Rops8g01776 631 Pfam Protein kinase domain 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01776 631 SMART serkin_6 339 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01776 631 Gene3D Transferase(Phosphotransferase) domain 1 415 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01776 Rops-Chr8 39903710 39906908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01776 12 630 Receptor kinase-like Gene Family AT5G02070 55.803 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops8g01776 Pkinase 4.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01776 - - aprc:113862410 1016.14