Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01775 ATGAGGATCGTAGCTCTCTCTCTTGTGGTTTTCACAATTACAGCAATGTTTACCCTAGCTTCATCTGTCAAACGTTGTCCAGATTGTGGTAAAACCCAGGTTCCATATCCATTAAGCACTGCACCAAATTGTGGTGACCAGTCCTACAAGATTCGCTGCACCACAGGCACACTCTGGTTCAACTCCATCAACGGTTCCTCTTACATGATCACCACCATCAACCCCACATTGCAACGTTTCATCGTTCACCCACCAGGTTTCGCCAACGACACTTGCATTTCCACTGATTTCCAAAACCAAGGGTTGTGGCTTGACGACAACTCACCCTTCAACATAACCTCCAGCAACACAGGGATTCTAATGAACTGTTCCCAAGATGTGTTCACCACGTTATGGAACTGTTCTTCTTCTAGTATTTGCCACAAGTACATTAAGGGCAATGCAAAAGCTTCCAAGGCTTGTGGGGCAACGAGCAATGCCTCGCAGATATGCTGTGATGTGAAGACTGGTGGGTCTAGTACAGCTCATAGATTAAGGGTGAGGAAAGAACGTTGTGCAGCATATGTTAGTTTTCCCAATTTGGATCCTTCTTTGCCTGTGAGTTTGTGGCAGCCAGGAGTGGAGATAGAGTGGGAGTTGCCGGAGGAGCCACCGTGCAAAGTGCCTCGAGATTGCTTGGATTTGGAGAACTCCAGTTGTTCGCCAGATCCGGTGAACGGTGGAGGAAAGAAGTGTTTCTGCAAGTCTGGCTTTCGGTGGGATCCTGTGAACGGAATATGTCAAAGCTTATCATTGGCTGGAGCTGCCATGCTAACAGTAGCCTTGATCACTGTATTGGTCTTTTACCTTCGGAGCCAAAGGATCAAAAGAGAAACCCAACAAAGCATAATAAGCAAGGCACGCAATATATTCAATGCAGACAACAGTGGCAAATCAGCAAAGATCTTCACCATGAAAGAGATCAAAAAGGCAACCAACAACTTCTCCAAAAGCAACCTCCTTGGTGCTGGTGGCTTTGGTGAGGTCTTCAAAGGAACACTTGATGATGGAACCATAACAGCCATCAAGAGACCCAAGATTGGAAACACCAGAGGTAATGATCAAATACTCAATGAGGTAAGAATCCTTTGCCAGGTTAACCACAGAAGCGTTGTGAGACTCTTGGGGTGTTGTGTTGAGCTTCCTACTCCTCTTCTTATCTATGAGTATGTCCCCAATGGAACCCTTTTTGAGCACCTCCATAACACCAACTCTGACAAATGGATCCGTCTTGGATGGCATTCAAGACTAAGAATTGCACACCAAACTTCTGAAGGGCTTGCATATCTTCACAATGCAGCTATACCCACAATCTATCACAGAGATATCAAGTCTAGTAACATTCTTTTGGATGATAACCTTGATGCTAAAGTTTCTGATTTTGGGCTTTCAAGGTTGGCTGTGAATGAAGCAAGTCACATCACAACTTGTGCTCAAGGAACCTTGGGTTATCTTGACCCTGAATATTACCTGAACTTTCAGCTTACAGATAAGAGTGACGTGTATAGTTTTGGGGTGGTTTTGTTGGAGCTGCTGAGTTCTAAAAAGGTAATTGATTTTAATAGAAAAGAAGAGGATGTGAACTTGGTGGTTTTGATCAAAAGGGCTTTGAAGGAAGGGAGGTTAATGGATGCAGTTGATCCTATGTTGAAAAGTGGAGCTAGTAGAGTGGAGTTCGAGAGTATGAAGGCATTTGGGTCTCTTGCTGCTGCTTGTGTAGATGATAGGAGGAAAAATAGACCCTCAATGAAAGATGTTGCTGATGAGATTGAATACATTATTGGTATTGTTGCGGATGTTAAGGCTGAAGTTTGA 1854 0.4412 MRIVALSLVVFTITAMFTLASSVKRCPDCGKTQVPYPLSTAPNCGDQSYKIRCTTGTLWFNSINGSSYMITTINPTLQRFIVHPPGFANDTCISTDFQNQGLWLDDNSPFNITSSNTGILMNCSQDVFTTLWNCSSSSICHKYIKGNAKASKACGATSNASQICCDVKTGGSSTAHRLRVRKERCAAYVSFPNLDPSLPVSLWQPGVEIEWELPEEPPCKVPRDCLDLENSSCSPDPVNGGGKKCFCKSGFRWDPVNGICQSLSLAGAAMLTVALITVLVFYLRSQRIKRETQQSIISKARNIFNADNSGKSAKIFTMKEIKKATNNFSKSNLLGAGGFGEVFKGTLDDGTITAIKRPKIGNTRGNDQILNEVRILCQVNHRSVVRLLGCCVELPTPLLIYEYVPNGTLFEHLHNTNSDKWIRLGWHSRLRIAHQTSEGLAYLHNAAIPTIYHRDIKSSNILLDDNLDAKVSDFGLSRLAVNEASHITTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLLELLSSKKVIDFNRKEEDVNLVVLIKRALKEGRLMDAVDPMLKSGASRVEFESMKAFGSLAAACVDDRRKNRPSMKDVADEIEYIIGIVADVKAEV* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01775 617 Gene3D Phosphorylase Kinase; domain 1 299 403 - -
Rops8g01775 617 FunFam Wall-associated receptor kinase-like 20 404 616 - -
Rops8g01775 617 ProSiteProfiles Protein kinase domain profile. 328 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01775 617 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 301 403 - -
Rops8g01775 617 SMART serkin_6 328 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01775 617 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Rops8g01775 617 Gene3D Transferase(Phosphotransferase) domain 1 404 612 - -
Rops8g01775 617 Pfam Protein kinase domain 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01775 617 SUPERFAMILY Protein kinase-like (PK-like) 308 602 IPR011009 -
Rops8g01775 617 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 606 IPR045274 GO:0007166
Rops8g01775 617 CDD STKc_IRAK 334 604 - -
Rops8g01775 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01775 Rops-Chr8 39870797 39875828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01775 25 616 Receptor kinase-like Gene Family AT5G02070 53.537 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops8g01775 Pkinase 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01775 - - gmx:100775709 940.258