Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01773 ATGGAAGCCACTTCTATAACTGAGTTGTTGAAGGGCTTTTGTGATAATACGCAGTGGCAATATGCTGTCTTTTGGAAGCTTAACCACCATTTTCCTATGACTTTGACCTGGGAAAATGGTTACCAGAAAAGAAACGAAGCTGTGGAAAGTATGTGGGGTGGCATCAACTTCAAACCCCCACATGAGGTATATTCTTCAAGTGGTAAAAGTACTGATGATGCAGGAGATTATTCAGCTCGACTACTCATGATTGAGATGTCTCATCGGAAATACAGTTTAGGAGAAGGAGTTGTTGGCAAAATAGCTCTTGCTGGGGATCATTGTTGGGTTTTCTGTGAGGATATTCTCACCAGTAAATTTGATACTGATTTAATTTCTGAGTGTGCTGATGAGTGGTTTCTTCAATTTGCATCTGGCATCAAGACTATTGTGCTGGTACCAGTTCTTCCACAAGGGGTTTTGCAATTTGGTTCATTTGAAGTGGTTGCTGAAGACCTGGAATTTGTTACCAATATCAAGGAGAAATTCCATTCCATTCATTGTCTGGAAGCTAATACTACACCTTTGAACTTTGGAATTGATAATCAAGATTGGTCATTCTCAGCCCGATCACATAATTTGGCAGATAGCTTGGATGAATCATCATCTATTACAAATAGTATATTGAAAGGTGAAGCTTCAGCTAGTACTGCACTCAATGTAAATGAGTCAACATGGTTGAGCCCAACAATGCTATCATTCATTCAGAATGACTGTTTCTTGTCTGGAGAAAATCAGCTAAAATCTCTCAAAAGAGAAAATGAAAATGAGATGGGTTCCTCATCAATTGAGATGTCAATTGATCCAAGTCATATTGGTCAGGTGGAGACAAAATTAAATCATATGGAAGAAGAGATATGGGCCTGGTCTCACTTGGTCAACAATTTGGAAGTGTTTGGAGAGATGTCAAATGGATTAGGCTCTTACTCTGGTAAAAATATGACAGAGCAACAATTTGAAGGCATTGAAACTGGTCATGATGATGTTAAGAATGTGAATGACATCACTTTTCCCTTGGAGTCTGAATTACACAAAGTACTTGGATCAGTTGCATATAGACATACAGGAAAATCTAAGTCGAAATATATCTCTGCTGAGGATTCATACAGTAGCTCAACTTTAATATCCAATAAAGAAGGGCATGATCATATTAAAGGTTTGGAGTTTCCCGAAGAAGTTGATCCAGAATATCTTTTGGATGCTGTTATTGGCAATTTGTGCAGTGCCTCTGATGATGCTTCAAGTATATCCAACAGTGTTAGGTCTCTTATAACCATGCCATTGGAGTTTACTGGTTCCATTCAGCCAAAAATTAATTCTGAAGAAAGCACTTTTGTTGTGAAAAATTCAGATGCGGGACACAATCTTATGCCTCCGGTTAAGGTCAAGGGAACAGATGAATTTACTAACCATTTAACATCACCATCTTTTGCTGGAAATTCAAGCTTATTGATTGATGAGGCACAGCAGGAAAAGGTTAATAGTCATATGCAGCCTATTAGTGGATCAAAGCTCTCTAGCACAAGCAAGAAAAGAGCAAGAGCCGGTAATAACCAAAAGTCAAGACCAAGAGATAGACAGATGATCATGGACAGGATGAAGGAGTTGAGGGAACTTATCCCAGATGGTGGTAGGTGTAGCATTGACAACCTCTTGGAACGGACCATAAACCACATGATGTACTTAAGAAAGATAACAAGCCAGGCCGAGAAACTGAAAAGATTTGAAGATTATGAGGTTCCTGAGTGGAAAAAACAGAAAATCATGGGCAGCCATCCTGGAAGGAGCTGTGCATTTGACTTTGAAAGTGAACTAGCATGGCCCATAGTCATAGAAGATCTGGAATTCTCAGGGCACATGCTCATAGAGATGATATGCCATGAGCATGGGCTTTTCTTGGAGATTGCTCAGGTAATCCGAAAGCTGGACATTACCATCTTGAAAGGGATTTTAGAACACCGTTCAAGCACCAGCTGGGCTTGTTTCATCGTTGAGGTTCCAAGAGGTTTTCACAGGATGGATGTTTTATGTCCTTTACTGCATCTTCTGCAACATAGAAGAAACACTGTCTCGTAA 2115 0.3967 MEATSITELLKGFCDNTQWQYAVFWKLNHHFPMTLTWENGYQKRNEAVESMWGGINFKPPHEVYSSSGKSTDDAGDYSARLLMIEMSHRKYSLGEGVVGKIALAGDHCWVFCEDILTSKFDTDLISECADEWFLQFASGIKTIVLVPVLPQGVLQFGSFEVVAEDLEFVTNIKEKFHSIHCLEANTTPLNFGIDNQDWSFSARSHNLADSLDESSSITNSILKGEASASTALNVNESTWLSPTMLSFIQNDCFLSGENQLKSLKRENENEMGSSSIEMSIDPSHIGQVETKLNHMEEEIWAWSHLVNNLEVFGEMSNGLGSYSGKNMTEQQFEGIETGHDDVKNVNDITFPLESELHKVLGSVAYRHTGKSKSKYISAEDSYSSSTLISNKEGHDHIKGLEFPEEVDPEYLLDAVIGNLCSASDDASSISNSVRSLITMPLEFTGSIQPKINSEESTFVVKNSDAGHNLMPPVKVKGTDEFTNHLTSPSFAGNSSLLIDEAQQEKVNSHMQPISGSKLSSTSKKRARAGNNQKSRPRDRQMIMDRMKELRELIPDGGRCSIDNLLERTINHMMYLRKITSQAEKLKRFEDYEVPEWKKQKIMGSHPGRSCAFDFESELAWPIVIEDLEFSGHMLIEMICHEHGLFLEIAQVIRKLDITILKGILEHRSSTSWACFIVEVPRGFHRMDVLCPLLHLLQHRRNTVS* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01773 704 MobiDBLite consensus disorder prediction 504 539 - -
Rops8g01773 704 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 223 702 IPR043561 GO:0003700|GO:0006355
Rops8g01773 704 MobiDBLite consensus disorder prediction 504 527 - -
Rops8g01773 704 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 176 IPR025610 -
Rops8g01773 704 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 526 575 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01773 Rops-Chr8 39780709 39786568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01773 324 701 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 33.744 4.12e-47 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01773 - - gmx:100776855 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01773 8 39780709 39786568 Rops8g01773 8 39780709 39786568 ECH