Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01745 ATGGATAATATGGGGCAATTATGCTTCTCCAATGATGTATGGTTAGAATGCCTTTACTGTCACTGTTGTTTCGAGGCATGGTATAATCGACATAAGCTGAATCCTAATATCCTATATAGTGGCCTTGTTGGAGGCCCTGAAAAAAATGGTGACTTTTCTTATGACAGATCCAATTATGAGCAAACTGATCCTACAATTTCAGGTTTTGCCCCTCTTGTAGGCATCTTCGCTGAACTGCATAGTTTATATAGTAATACAGAATTAATTCTCTTCATTATTCATAGAATCTGGAAAGCAGGAATTTCATCCACTAATGGCTCAACATCCATCAACCAAGAGCCGCTTTCTGATGATTCTAGAAAAGTAATGTCTGCTGCCAAGCTTGCTGAGCTTGCCAAAGCTGATCCCAAGCGTGCTAGAAGGATATGGGCTAATAGACAGTCTGCTGCAAGATCAAAAGAAATGAGGAACCGTTACATTTCTGAGCTTGAAAACAGGGTGGAGATCTTGCAAGCTGAATCGACATCCTTGTCTGCAGAATTAAACAGATTGCTGAGAAGTATACATGACCTGGCTGCTCAGAACAATGAGATGAGGTTGCAGTTGCAAGCCATGCATCAACAAGTTCAACTGCAAACTGCATTGAACAATGCAATGAGAGAGGAAGTTGAGCATTTGAGAATTCTGACTGGGCAAGTGCCAAATGGACCTAGGAAGCCTGCTTCACTTCGAGGGGGACAACAAAACAATTCCAACAATCAGGCCATGGAACCTCATTTAGCTTTACAACAGCTTCAACAGCTTCAAATTCGTTCTCGAAATCAGCAGCAGCAACCACAGCCACTGCCACAGAATCAGGCAAAGCAGCAACAGAAGAAGCAGGACCATAAAGAGGAAAAGTAG 903 0.423 MDNMGQLCFSNDVWLECLYCHCCFEAWYNRHKLNPNILYSGLVGGPEKNGDFSYDRSNYEQTDPTISGFAPLVGIFAELHSLYSNTELILFIIHRIWKAGISSTNGSTSINQEPLSDDSRKVMSAAKLAELAKADPKRARRIWANRQSAARSKEMRNRYISELENRVEILQAESTSLSAELNRLLRSIHDLAAQNNEMRLQLQAMHQQVQLQTALNNAMREEVEHLRILTGQVPNGPRKPASLRGGQQNNSNNQAMEPHLALQQLQQLQIRSRNQQQQPQPLPQNQAKQQQKKQDHKEEK* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01745 300 MobiDBLite consensus disorder prediction 229 300 - -
Rops8g01745 300 MobiDBLite consensus disorder prediction 242 289 - -
Rops8g01745 300 SUPERFAMILY Leucine zipper domain 137 189 IPR046347 GO:0003700|GO:0006355
Rops8g01745 300 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 135 198 IPR004827 GO:0003700|GO:0006355
Rops8g01745 300 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 105 293 - -
Rops8g01745 300 SMART brlzneu 133 197 IPR004827 GO:0003700|GO:0006355
Rops8g01745 300 SUPERFAMILY Six-hairpin glycosidases 19 94 IPR008928 GO:0005975
Rops8g01745 300 CDD bZIP_plant_RF2 138 186 IPR044759 GO:0003700|GO:0006355
Rops8g01745 300 Coils Coil 160 208 - -
Rops8g01745 300 Pfam bZIP transcription factor 137 195 IPR004827 GO:0003700|GO:0006355
Rops8g01745 300 Gene3D - 17 92 IPR012341 GO:0005975
Rops8g01745 300 Gene3D - 136 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01745 Rops-Chr8 39152203 39153728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01745 103 272 bZIP Transcription Factor Family AT2G31370 53.005 4.87e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops8g01745 bZIP_1 1.2e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01745 - - pop:18106892 164.466