Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01724 ATGGGTATGGCTACACGTGTCCCACTTGTCTCCGCTACCATTTCTCCCAACCAACGCCATAAATACTGCAGGGTGGCGCAGTCACTTCCTCCACCTGTTTATTCTTCCTCATTAAGGCTTCACTCTCTTCAATCTTCTTTTTCTTCTTCATTGTCTTCGCTGTCATTAGCACCACTGAAAAGGCACAAGGGTCTGAAGAGGGTTGAAATCAGAACTTTTGTTGTAGCCATGGCTGAGTCATCAAAGAGCACTGTGCTTGTTACTGGAGCTGGTGGTCGCACAGGACAAATAGTTTATAAAAAATTAAAAGAGAGGCCAAACCAATATGTAGCTAGAGGTCTGGTTAGAACAGAAGAAAGCAAACAGAAAATTGGTGCTGCAGATGATGTTTTTGTTGGCGATATAAGAGATGCTGGAAGTATTGTTTCTGCAATTCAAGGCATAGATGCTCTCATAATCCTCACAAGTGCAGTGCCACTGATAAAACCTGGGTTTGATCCCACCAAAGGTCAAAGACCAGAGTTCTATTTTGAAGATGGTGCATACCCTGAACAGGTTGACTGGATTGGGCAGAAAAATCAAATAGATGCTGCTAAGGCTGCAGGAGTGAAGCAGATTGTGTTGCTAGGGTCTATGGGTGGAACAGACCTTAACCATCCTTTGAACAGTTTGGGTAATGGGAATATATTGGTTTGGAAAAGAAAGGCTGAGCAATATCTGGCTGATTCTGGTATTCCATACACGATTATAAGGGCTGGTGGCTTGCAAGACAGGGAGGGAGGGATTCGCGAACTCATTGTAGGGAAGGATGATGAGCTTCTCCAGACTGAAACCAGAACCATAACTAGAGCTGATGTTGCAGAAGTCTGCATCCAGGCACTAAATTTTGAGGAGGCTCAATTTAAGGCATTTGACTTGGCATCAAAACCTGAGGGTGCAGGTTCACCAACAAAGGACTTTAAGGCTTTATTTTCCGAGATCACTACTCGTTTTTGA 996 0.4388 MGMATRVPLVSATISPNQRHKYCRVAQSLPPPVYSSSLRLHSLQSSFSSSLSSLSLAPLKRHKGLKRVEIRTFVVAMAESSKSTVLVTGAGGRTGQIVYKKLKERPNQYVARGLVRTEESKQKIGAADDVFVGDIRDAGSIVSAIQGIDALIILTSAVPLIKPGFDPTKGQRPEFYFEDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLLGSMGGTDLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDREGGIRELIVGKDDELLQTETRTITRADVAEVCIQALNFEEAQFKAFDLASKPEGAGSPTKDFKALFSEITTRF* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01724 331 Pfam NAD(P)H-binding 89 295 IPR016040 -
Rops8g01724 331 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 82 308 IPR036291 -
Rops8g01724 331 Gene3D - 80 331 - -
Rops8g01724 331 CDD SDR_a5 84 306 - -
Rops8g01724 331 FunFam Uncharacterized protein At5g02240 81 331 - -
Rops8g01724 331 PANTHER NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED 78 331 IPR044163 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01724 Rops-Chr8 38556382 38560989 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01724 77 218 Monolignol Biosynthesis Gene Families AT2G33590 30.000 4.48e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01724 - - vra:106754550 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01724 8 38556382 38560989 Rops8g01724 8 38556382 38560989 ECH