Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01708 ATGGGTAACCAAATCGGAAAGCTTTGCCTCTGCTCTGCCGGCGCCGGCGCCGGAGCTGGAGATATCTCTGGAAGGTTGGAGAACAACATTGCTTTTCTATCCAATAAATACGACAAAGCTATTGGCAACTCCATCTGCTATGTAAGACCGGACCCATGCCGGTTCAACGGCGATGTATTTTCCGATGATGACGTCACCCTCATGACTTTCCGGTCAGTTTCCGGCGCCACCGTGAGTGCAAACTCTTCAGCAACACCTTCCACTTCCCTTGATGATTCTCTTCTGCACAGCATCGCTTTGGATTCTTCTGCTTCTTTTGAGAGTTCTGGTTCCTTCACTTCGACGATTGTGCCTCTGCAGCATGATCCTCGTGGCTTCTTTGTGTGTAGCTCCGTTGAGAGAGGGTTATCTTGGGGTCCTATAGAGGGCGTGCCAAGTCCTTGTGATCGTGTTTTGAATGGTGGCTCTAACATGAGGAGAAGCTTGTCTCATAGTGGATATGAGTTTCAGAACAAACACAGTAAGAGAAGCTTGAAGAAGGTTCTGAGTAGAGCGTTTTTAAGCACATTATCTCTTGGGAAAAGTATTCTCAAGAAAAATGATAATGCTAACGCTAATACCAAAGTGAGTTGTAGTACTAGCTTGAGTGGTGAATTGAGATTACATGGTGACAAGGGTGATGATAACTATTTGGATGATGGTGGAGGAGACACTGACATGTTAATGGAGTGTCAGAGTCTTCATTGGGCTCAAGGGAGAGCTGGTGAGGATCGTGTGCATCTTGTGATTTGTGAGAATCATGGATGGGTTTTTGTGGGGATTTATGATGGATTTAATGGCCCTGATGCCACTGATTATCTTCTTAACAATCTGTTTTATGCTGCGCATGATGAGCTCAAGGGGCTACTATGTAGTCACAAGTCTGAATCCATGGCTACTACCTCTGATATGGCCAAGTCTAGCTCTTTGACTAGGAGAAATAGCAATGAAGAGGTGAGAATGATGCGGGAATGTGAGGGGGATAGTGAAAAAGTAGAACTTGAAAAGAGAATGCAGGTAAACTTGAGTAATGCACAAGCAAAAAGTGCAGGAGCTTTTAGCCACTCAGATGTGTTACAAGCTCTTTCAGAGGCGTTGAGGAAGACTGAGGATGCATTTTTGAAGACAGCTGATGAAATGATTACTCAGAATCCTGTGTTGGCTATGATGGGTTCTTGTGTTTTGGTAATGGTAATGAAGGGAGAAGATGTTTACTTGATGAATGTGGGTGATAGTCGTGCTGTTTTAGCTACTCAGACTGGGAATTCCCTTCAGCTAACGATGGAGCATAGCACTCACGTGAAAGAGGAGGTTTACAGAATATGGAGGGAGCACCCCGATGACCCTTCTGCAGTAACTAAAGGCCGCGTGAAAGGTTACTTGAGTGTCACAAGGGCTTTCGGGGCTGGGTTCCTTAAGCAGCCTAAACAAAATAATGCAGTGTTGGAGACTTTCAAAGTTAGCTACATAGGTGAATCTCCTTATATCACATGTTCACCTTCACTCCACCACCACAGGCTCAGCCCAAATGACAAATTCCTAATACTATCTTCTGATGGACTTTACCAATACTTCACCAATGAAGAAGCAGTTGCCAAAGTGGAGTCATTCATCACCATGTTTCCAGATAGAGATCCTGCACAACTTCTCATTGAAGAAGCATTAAGTAGAGCAGCAAAAAAAGCTGGTATGGAGTTCCATGAGTTGCTTGATATTCCACTAGGGGAACGGCGTCTTTACCATGATGACATCTCTATTGTCATAATCTCCTTGGAGGGAAATATATGGCGTTCATTGGTGTAA 1842 0.4441 MGNQIGKLCLCSAGAGAGAGDISGRLENNIAFLSNKYDKAIGNSICYVRPDPCRFNGDVFSDDDVTLMTFRSVSGATVSANSSATPSTSLDDSLLHSIALDSSASFESSGSFTSTIVPLQHDPRGFFVCSSVERGLSWGPIEGVPSPCDRVLNGGSNMRRSLSHSGYEFQNKHSKRSLKKVLSRAFLSTLSLGKSILKKNDNANANTKVSCSTSLSGELRLHGDKGDDNYLDDGGGDTDMLMECQSLHWAQGRAGEDRVHLVICENHGWVFVGIYDGFNGPDATDYLLNNLFYAAHDELKGLLCSHKSESMATTSDMAKSSSLTRRNSNEEVRMMRECEGDSEKVELEKRMQVNLSNAQAKSAGAFSHSDVLQALSEALRKTEDAFLKTADEMITQNPVLAMMGSCVLVMVMKGEDVYLMNVGDSRAVLATQTGNSLQLTMEHSTHVKEEVYRIWREHPDDPSAVTKGRVKGYLSVTRAFGAGFLKQPKQNNAVLETFKVSYIGESPYITCSPSLHHHRLSPNDKFLILSSDGLYQYFTNEEAVAKVESFITMFPDRDPAQLLIEEALSRAAKKAGMEFHELLDIPLGERRLYHDDISIVIISLEGNIWRSLV* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01708 613 Pfam Protein phosphatase 2C 327 573 IPR001932 -
Rops8g01708 613 SUPERFAMILY PP2C-like 252 605 IPR036457 -
Rops8g01708 613 CDD PP2Cc 254 604 IPR001932 -
Rops8g01708 613 PANTHER PROTEIN PHOSPHATASE 2C 210 602 IPR015655 GO:0004722|GO:0006470
Rops8g01708 613 Gene3D - 220 609 IPR036457 -
Rops8g01708 613 ProSiteProfiles PPM-type phosphatase domain profile. 239 604 IPR001932 -
Rops8g01708 613 SMART PP2C_4 240 602 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01708 Rops-Chr8 38086309 38091464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01708 1 613 PP2C-type Phosphatase Gene Family AT1G07630 47.500 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01708 - K01102 gmx:100804061 758.444