Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01704 ATGCCTTCGTCTTCTACCTCCATCTCCATAACCAACCTCTCTCACCTTCGCTCTCTTTTCTTATTCTTCTTCTTTAGAAAATGGGCCATAAAGGACTACACAATCGCCGCATTCACCTTCCTCATCCTCTTCTCCCTCGCTATCCTCTTTCATTTCGATTCCAATCCCAATCCCAATCCCAACCCTAACCTCCTCATTCCCTTCACCCCTCTCTCTAACGCCATCCAAAGAGGCGCACTTTGCTTGGATGGGAGTGCCCCTGGCTATCATTTCCAAAAGGGCTTCGGATCCGGATCTCGCAATTGGTTGCTCCATATCGAGGGAGGAGGGTGGTGCAATTCGATGTCTTCCTGTTCTCGGCGAAAATTCACCGCTTTGGGCTCATCCAAGTATATGGAAACTCTCGTCCCTTTTTCCGGAATTTTAAGCTCTGACCCTTCTCAAAATCCTGATTTCTTTCACTGGAACAAGGTGAACATACGGTATTGTGATGGTGCATCTTTTGCTGGTCACCCAGAGAGTGAGAAAGGAAGTGGGTTGTTCTTCAGGGGCCAGATTATATGGGAAGCTATTATGGATGAACTCTTATCAATTGGCATGTCTAAAGCAAAACAGGCTCTGCTTTCGGGATGCTCTGCTGGAGGGTTGGCAACTCTTATACATTGTGATGACTTCCGACATGTACTTCCAAAGGAGGCCACTGTCAAGTGTCTTGCAGATGCAGGCTTCTTCCTAGACGAGAAGGATATTAGTGGAAATAGCACAATGAGATCTTTCTATCATGATGTTGTCCAGCTTCAGGGTGTTGCAAAAAGTTTGCAAAAAGAGTGCCTTGCTAAAATGGATCCATCTAAGTGTCTCTTTCCATCAGAATTTCTTAAAAATATAAAGACTCCAGTTTTCCTTGTTCACTCAGCATATGATTTTTGGCAGATTCACAATATTTTGGTACCTGAAGGATCAGATCCTCATGGTCGCTGGAAAAGCTGCAGATTGAACATTCACAATTGTAATGCTGACCTGATTGATATACTTGACCGTTTCCGTGGTTCTTTGCTGAAGGCTGTGAATGAATTCCAGCAACAAAAGGAGATTGGAATGTTTATAAATTCATGCTTTATCCATTGCCAGACTTGGAAGGGTGAGACATGGCATTCACCAAATTCTCCTAAAATAAACGATAAGACAATTGCTGAATCTGTTGCTGATTGGTTCTTTGACCGAGGAGTGGTAAAGCTTATTGACTGCCCTTTTCCATGCAATCCTACTTGCCATAATATGGATTTCACCAGAGTATAA 1299 0.4357 MPSSSTSISITNLSHLRSLFLFFFFRKWAIKDYTIAAFTFLILFSLAILFHFDSNPNPNPNPNLLIPFTPLSNAIQRGALCLDGSAPGYHFQKGFGSGSRNWLLHIEGGGWCNSMSSCSRRKFTALGSSKYMETLVPFSGILSSDPSQNPDFFHWNKVNIRYCDGASFAGHPESEKGSGLFFRGQIIWEAIMDELLSIGMSKAKQALLSGCSAGGLATLIHCDDFRHVLPKEATVKCLADAGFFLDEKDISGNSTMRSFYHDVVQLQGVAKSLQKECLAKMDPSKCLFPSEFLKNIKTPVFLVHSAYDFWQIHNILVPEGSDPHGRWKSCRLNIHNCNADLIDILDRFRGSLLKAVNEFQQQKEIGMFINSCFIHCQTWKGETWHSPNSPKINDKTIAESVADWFFDRGVVKLIDCPFPCNPTCHNMDFTRV* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01704 432 Pfam Pectinacetylesterase 65 409 IPR004963 GO:0016787
Rops8g01704 432 SUPERFAMILY alpha/beta-Hydrolases 170 310 IPR029058 -
Rops8g01704 432 PANTHER NOTUM-RELATED 46 427 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01704 Rops-Chr8 38063637 38068765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01704 26 396 Carbohydrate Esterase AT3G09410 59.580 1.19e-167 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01704 K19882 - gmx:100792819 670.618