Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01674 ATGGCTGAGTTTTTGAGGCAATTGCCAATGTCGATGCCGAGGCAAGCCTTGAGCAACCACAACCACCACCAAATGCCGAGGCAAGCTTTCATCACCAACCATCACCATCACCATCACCACCATCACTATCACTATCACTATCTTCAGTGTGTTCTCCATGTTCTCTTCTTTACACTTCTTGTCCCTCTTTCCTTTGGTGCAAATGATGAAGTTGGTGTCTTAGTTTCATGGATGCGTAGTTCCTCCAAAGTTCCTTCAGCTTTTTCTAACTGGAACCCTTTGGACTCTAGTCCTTGCAAATGGTCTTACATCAAATGCTCTTCAGAAAGTTTTGTCACTGAGATAAACATTCAAAATGTTGATTTAGCCCTTCCTTTTCTTTCCAATATCTCTTCCCTTCCCTTCCTTCAAAAGCTTGTCATTTCTGGGGCTAACCTCACTGGGGCTATTTCACCTGACATTGGGAATTGCCTTGAGCTTACAGTCATTGATCTTAGCTCAAATAGCCTTGTGGGTGGCATTCCTTCAAGCATTGGGAAGCTCAAAAATCTCCAAGCCTTTAGCTTGGACTCTAACCAGCTCACTGGGCCAATCCCAAGGGAGCTTGGTGATTGTGTCAGTCTTAAGAACCTTAACATTTTTGACAACAACCTTAGTGGGGATCTTCCTGTTGAGCTGGGAAAGCTTTCAAATCTGGAGGTTATAAGAGCAGGAGGAAATAAGGACATTGTAGGGAAGATTCCAGATGAGCTTGGAGGTTGCAGGAATTTGACAGTGTTGGGTCTTGCTGACACTAAAATTTCTGGTTCAATGCCTGCTTCACTTGGTAAGCTAAGCATGCTTCAAACCTTATCTGTTTATAGTACCATGCTCTCTGGTGAGATTCCTCCTGAAATAGGCAAATGTTCAGAGCTTGTGAACTTGTTTTTGTATGAGAATGATCTCTCTGGTTCCCTTCCAAAAGAGTTAGGCAAGCTACAGAAGCTGGAAAGAATGCTGCTGTGGCAAAACAATTTTGTTGGGAGCATTCCTGAGGAAATTGGCAACTGCAGAAGCTTGAAGATTCTTGATGTCTCCTTAAATTCTTTCTCTGGTGGAATACCTCAAAGTTTGGGGCAACTCTCAAATCTTGAAGAGCTCATGCTAAGTAACAATAACATCTCTGGTTCAATACCATCTGCTCTTTCCAATCTTACAAACCTTGTCCAGTTGCAGTTAGATACAAATCAACTATCAGGTTCAATTCCACCTGAGCTTGGAAGGTTGACAAAACTAACAGTCTTTTTTGCTTGGCAGAACAACCTTGAAGGTGGCATTCCATCAGCATTGGGAGGTTGTAGAAGCCTTGAGGCTTTGGATTTATCATACAATGCACTCAATGAGAGCTTACCCCCAGGCCTATTTAAGCTTCAAAATTTAACAAAGCTTCTACTAATCTCTAATCATATTTCTGGTCCCATTCCCCATGAGGTTGGTAACTGCAGTTCTCTCATTCGACTCCGGCTTGTAGACAACAGAATCAATGGAGAGATACCAAGAGAAATTGGCTTCCTCAACAACCTCAGTTTCCTTGATCTATCTGAAAATCATCTCACTGGGTCAGTACCAGCAGAGATTGGAAACTGTAAAGAACTTCAAATGCTGAATCTAAGCAATAACTCCCTTTCTGGTGCTTTGCCTAGTTATTTGTCTTCCCTCACAAAGCTAGAGGTCTTGGATGTTTCTCTGAATAACTTCTCTGGTGAGGTTCCAATGAGTATTGGCCAACTCACTTCACTTCTTAGAGTCATTATAAGCAAAAACTCTTTCTCTGGATCAATTCCCTCCTCACTTGGGCAATGTTCAGGTATTCAACTGCTAGACCTTAGCAGCAACATGTTCTCAGGGAGCATCCCAGTAGAACTGTTTCAAATTGAAGCACTTGGTATTGCTCTTAATTTGAGTCATAATGCATTATCTGGAGTCATCCCACCAGAAATTTCAGCTTTGAACAAGCTGTCTGTTCTAGACCTTTCACATAACAAGCTTGAAGGTGACTTGATGGTGTTTTCAGGGCTTGAAAATCTTGTTTCTTTGAACATTTCCTACAACAAGTTCACTGGTTATCTACCAGACAGCAAGTTATTCCACCAACTATCAGCAACAGACTTGGCTGGAAATCAAGGCCTGTGTCCTAATGGTCATGATTCATGTTTTGTTAGCAATGCTGCAATGACAAAATTGCTAAATGGCACTAATTCTAAGAGGTCAGAGATAATCAAACTGGCCATTGGATTGCTCAGTGCCTTGACTGTTGCAATGGTAATCTTCGGAGTTGTTACAGTCCTTCGAGCAAGGAAAATGATTCGAGATGACAATGATTCTGAGATGGGAGGAGATTCATGGCCTTGGCAGTTCACTCCATTCCAAAAGGTGAATTTCTCTGTGGGGCAAGTTTTAAAATGTTTGGTGGAATCCAATGTAATTGGAAAAGGGTGTTCAGGGATTGTTTATCGTGCTGAAATGGAAAATGGTGATGTCATTGCTGTGAAAAGGCTATGGCCAACAACAAGGGCTGCTAGATATGATAATCAAAGTGACAAGTTAGCAGTTGGAGGAGTTCGTGATTCCTTTTCAGCTGAGGTAAAAACTCTTGGATCAATTCGCCACAAGAACATTGTTAGGTTCTTGGGTTGCTGTTGGAACAGAAACACAAGATTGCTTATGTATGATTACATGCCAAATGGGAGTTTAGGAAGTCTACTTCATGAAAGAAGTGGCAACTGCTTGGAATGGGACATCAGATTTCGGATAATACTAGGAGCAGCTCAAGGTTTGGCTTATTTACACCATGATTGTGCCCCTCCAATTGTTCATAGGGACATTAAGGCCAACAACATCCTCATAGGCCCTGAATTTGAACCATATATAGCTGATTTTGGGCTTGCAAAACTTGTTGATGATGGAGATTTTGCAAGATCTTCTAGTACACTAGCTGGTTCCTATGGTTACATAGCTCCTGAGTATGGGTATATGATGAAGATAACAGAGAAAAGTGATGTTTACAGCTATGGTATTGTTGTATTAGAAGTACTGACAGGGAAGCAACCAATTGATCCAACAATACCTGATGGACTCCATATTGTTGATTGGGTAAGACAGCAAAGAGGGGGAGTTCAAGTGCTAGATGAAAGCTTAAGAGCTAGGCCAGAATCTGAAATTGAGGAGATGTTGCAAACCTTAGGTGTGGCTTTGCTATGTGTAAACTCAAGCCCAGATGACAGGCCAACCATGAAAGATGTGGTAGCAATGATGAAAGAGATTAGGCAAGAGAGAGAGGAATGTTTGAAAGTTGACATGCTTCTTGATGGATCTTCTGCAAATGATCACCAAGATAGTAATCATTCATATGAAGAACCAATGTCTATGTTGAAACAAGCATGCCCAACAAGCAGCAGCAACACAAATCTGCATTTGCATTACTCTCCCCATCATCCTTCAACACTAAAGTAA 3492 0.4161 MAEFLRQLPMSMPRQALSNHNHHQMPRQAFITNHHHHHHHHHYHYHYLQCVLHVLFFTLLVPLSFGANDEVGVLVSWMRSSSKVPSAFSNWNPLDSSPCKWSYIKCSSESFVTEINIQNVDLALPFLSNISSLPFLQKLVISGANLTGAISPDIGNCLELTVIDLSSNSLVGGIPSSIGKLKNLQAFSLDSNQLTGPIPRELGDCVSLKNLNIFDNNLSGDLPVELGKLSNLEVIRAGGNKDIVGKIPDELGGCRNLTVLGLADTKISGSMPASLGKLSMLQTLSVYSTMLSGEIPPEIGKCSELVNLFLYENDLSGSLPKELGKLQKLERMLLWQNNFVGSIPEEIGNCRSLKILDVSLNSFSGGIPQSLGQLSNLEELMLSNNNISGSIPSALSNLTNLVQLQLDTNQLSGSIPPELGRLTKLTVFFAWQNNLEGGIPSALGGCRSLEALDLSYNALNESLPPGLFKLQNLTKLLLISNHISGPIPHEVGNCSSLIRLRLVDNRINGEIPREIGFLNNLSFLDLSENHLTGSVPAEIGNCKELQMLNLSNNSLSGALPSYLSSLTKLEVLDVSLNNFSGEVPMSIGQLTSLLRVIISKNSFSGSIPSSLGQCSGIQLLDLSSNMFSGSIPVELFQIEALGIALNLSHNALSGVIPPEISALNKLSVLDLSHNKLEGDLMVFSGLENLVSLNISYNKFTGYLPDSKLFHQLSATDLAGNQGLCPNGHDSCFVSNAAMTKLLNGTNSKRSEIIKLAIGLLSALTVAMVIFGVVTVLRARKMIRDDNDSEMGGDSWPWQFTPFQKVNFSVGQVLKCLVESNVIGKGCSGIVYRAEMENGDVIAVKRLWPTTRAARYDNQSDKLAVGGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERSGNCLEWDIRFRIILGAAQGLAYLHHDCAPPIVHRDIKANNILIGPEFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPEYGYMMKITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGLHIVDWVRQQRGGVQVLDESLRARPESEIEEMLQTLGVALLCVNSSPDDRPTMKDVVAMMKEIRQEREECLKVDMLLDGSSANDHQDSNHSYEEPMSMLKQACPTSSSNTNLHLHYSPHHPSTLK* 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01674 1163 ProSiteProfiles Leucine-rich repeat profile. 376 399 IPR001611 GO:0005515
Rops8g01674 1163 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 322 430 - -
Rops8g01674 1163 ProSitePatterns Serine/Threonine protein kinases active-site signature. 950 962 IPR008271 GO:0004672|GO:0006468
Rops8g01674 1163 Pfam Leucine rich repeat N-terminal domain 68 107 IPR013210 -
Rops8g01674 1163 SUPERFAMILY L domain-like 462 724 - -
Rops8g01674 1163 Gene3D Ribonuclease Inhibitor 226 363 IPR032675 -
Rops8g01674 1163 SMART LRR_sd22_2 374 400 - -
Rops8g01674 1163 SMART LRR_sd22_2 422 454 - -
Rops8g01674 1163 SMART LRR_sd22_2 157 186 - -
Rops8g01674 1163 SMART LRR_sd22_2 663 688 - -
Rops8g01674 1163 SUPERFAMILY RNI-like 246 532 - -
Rops8g01674 1163 Gene3D Ribonuclease Inhibitor 364 461 IPR032675 -
Rops8g01674 1163 SMART LRR_typ_2 518 542 IPR003591 -
Rops8g01674 1163 SMART LRR_typ_2 446 470 IPR003591 -
Rops8g01674 1163 SMART LRR_typ_2 374 397 IPR003591 -
Rops8g01674 1163 SMART LRR_typ_2 566 590 IPR003591 -
Rops8g01674 1163 SMART LRR_typ_2 398 422 IPR003591 -
Rops8g01674 1163 SMART LRR_typ_2 686 711 IPR003591 -
Rops8g01674 1163 SMART LRR_typ_2 663 685 IPR003591 -
Rops8g01674 1163 SMART LRR_typ_2 326 350 IPR003591 -
Rops8g01674 1163 SMART LRR_typ_2 181 205 IPR003591 -
Rops8g01674 1163 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 906 1116 - -
Rops8g01674 1163 ProSiteProfiles Protein kinase domain profile. 816 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01674 1163 Pfam Leucine rich repeat 351 411 IPR001611 GO:0005515
Rops8g01674 1163 Pfam Leucine rich repeat 159 218 IPR001611 GO:0005515
Rops8g01674 1163 SUPERFAMILY L domain-like 68 340 - -
Rops8g01674 1163 Gene3D Ribonuclease Inhibitor 559 640 IPR032675 -
Rops8g01674 1163 Gene3D Ribonuclease Inhibitor 462 558 IPR032675 -
Rops8g01674 1163 Gene3D Ribonuclease Inhibitor 641 731 IPR032675 -
Rops8g01674 1163 Gene3D Ribonuclease Inhibitor 67 225 IPR032675 -
Rops8g01674 1163 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 448 735 - -
Rops8g01674 1163 ProSitePatterns Protein kinases ATP-binding region signature. 822 844 IPR017441 GO:0005524
Rops8g01674 1163 FunFam Nuclear pore complex protein NUP107 67 222 - -
Rops8g01674 1163 PANTHER RECEPTOR-LIKE PROTEIN 55 462 1103 - -
Rops8g01674 1163 SUPERFAMILY Protein kinase-like (PK-like) 801 1098 IPR011009 -
Rops8g01674 1163 Pfam Protein tyrosine and serine/threonine kinase 819 1096 IPR001245 GO:0004672|GO:0006468
Rops8g01674 1163 FunFam Predicted protein 223 321 - -
Rops8g01674 1163 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 799 905 - -
Rops8g01674 1163 PRINTS Leucine-rich repeat signature 521 534 - -
Rops8g01674 1163 PRINTS Leucine-rich repeat signature 663 676 - -
Rops8g01674 1163 Gene3D Phosphorylase Kinase; domain 1 802 905 - -
Rops8g01674 1163 MobiDBLite consensus disorder prediction 1140 1163 - -
Rops8g01674 1163 Gene3D Transferase(Phosphotransferase) domain 1 906 1119 - -
Rops8g01674 1163 SMART serkin_6 816 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01674 Rops-Chr8 37313142 37316978 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01674 69 1117 Receptor kinase-like Gene Family AT5G56040 47.274 0.0 960
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops8g01674 Pkinase 2.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01674 - - gmx:100815339 1965.66