Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01667 ATGGCAACGGCAACATACCCACCACCGCCACCTTATTACAGACTTTACAAAGATTACTTGCAAGACCCTAAGTCTGCTCCTGAGCCTCCACCCCCAATTGAAGGGACTTACGTTTGTTTTGGAGGCAATTACACTACTAGTGATGTTCTACCAAGCTTGGAAGAACAAGGGGTGCGCCAGCTCTATTCAAAGGGGCCTAATGTTGATTTCAAGAAAGAGCTAAGGTCACTTAATAGAGAGTTGCAACTACACATTTTGGAGCTTGCTGATATTCTTATTGAGAGACCTTCACAGTATGCAAGGAGAATTGAAGAAATTTCAACCGTATTCAAAAACATACATCACCTTTTAAATTCACTGCGTCCTCACCAGGCGAGAGCAACATTGATTCACATTTTGGAACTTCAGATACAGCGCCGCAAACAAGCAGTGGAGGACATAAAGAGGAGGAGAGAAGAAGCTCGAAATCTCCTTAAGGAGTCCCTGGCAACTCTTGATGGCCATTAA 507 0.4379 MATATYPPPPPYYRLYKDYLQDPKSAPEPPPPIEGTYVCFGGNYTTSDVLPSLEEQGVRQLYSKGPNVDFKKELRSLNRELQLHILELADILIERPSQYARRIEEISTVFKNIHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEARNLLKESLATLDGH* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01667 168 Coils Coil 67 87 - -
Rops8g01667 168 Coils Coil 130 164 - -
Rops8g01667 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
Rops8g01667 168 Gene3D - 60 159 IPR044888 -
Rops8g01667 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Rops8g01667 168 SUPERFAMILY Mediator hinge subcomplex-like 66 159 IPR037212 GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01667 Rops-Chr8 37127825 37132977 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Rops8g01667 Med7 1.2e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01667 K15148 - cave:132192188 305.834