Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01665 ATGTGTACTGATATTCCTCAGAATATAGAGTTGGAGGATGAGGAAAAGGTAGCCAAAGTTGGAGAAAGCCAAGAAGAAGATACAACATCAAGAGTTTTTCCATGTCTATTTTGTTCAAGAAAGTTCTACAGTTCTCAAGCTTTAGGGGGGCACCAAAATGCTCACAAGAAAGAGAGGACAGCTGCAAGGAAGGCCAAGAGGGCTTCTGAGTACTCATGTGTTTCCTTCGCTTCCCCACTGCCAACTCCTTTGGTTTTTGCTCCAACCAATCAACTAGGTATTTTAAATCCTTCAATGTTCATCACTGCCCATGCAGCAAATATCCCTTGTCTCCCAAGCCATCAAATTTCAGAACAATTTGGATCAAATGGTGCACCTAGATTTGGCAATGCTTTGTTTCATTGTGGAAGTTCAAAGAGCCCGTTACGTGATGAAGATGGAAAAGGTTTCATTAATTGGCAAAAGAGTGTAAGATGCAATAACTTCAGCAAGGGCGATACATCTCAACATTTAGCATTGATAAGTAACAATCAAACTCTTGGAATTTGGAAAGATGGTACAGAAAAAGATCAAAAGCTTGATTTGTCTCTTCATTTGTAG 600 0.3983 MCTDIPQNIELEDEEKVAKVGESQEEDTTSRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRASEYSCVSFASPLPTPLVFAPTNQLGILNPSMFITAHAANIPCLPSHQISEQFGSNGAPRFGNALFHCGSSKSPLRDEDGKGFINWQKSVRCNNFSKGDTSQHLALISNNQTLGIWKDGTEKDQKLDLSLHL* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01665 199 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
Rops8g01665 199 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 21 199 IPR044246 GO:0009788
Rops8g01665 199 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Rops8g01665 199 Gene3D Classic Zinc Finger 11 78 - -
Rops8g01665 199 SUPERFAMILY beta-beta-alpha zinc fingers 29 60 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01665 Rops-Chr8 37116061 37116768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01665 4 199 C2H2 Transcription Factor Family AT5G48890 38.308 2.25e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01665 - - gmx:100792059 276.944