Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01663 ATGCTGCAATTGGCTGCTTCTGGGTCCCCTGCTTTGCTCTTCTATTTCCATATTTTTGGAAATCTCTCTCTCTCTTTCACTCACTGTTACTCATTCTCTACATCTCACCGCCGTCGACTACACCATCGACCTTCCTATTCGAGTGTAGATAAGATGGCAGAAGAGGATCCAAAACCTCTCAACTTTATTCCAGAGGTTATATTGAAGAAGAGGAAAAGCAATGCAGCATATGCCTTGAGAAGAAAGCAGCAATTACAGCAGAAAAATTTCCAATCCAGGAAGAGCAAGGATTTCATCAAAAAGCCTGAAGATTTCATTTTTGAATATCGCAACAAGGAGCTGGACCTTATTAGATTGAAAAGGAGGGTCAAGAGGAAACTACCAGAACTATTAACCCCAAGCTCCAAGCCCTTGATAGTCATTCGGATACAGGGGAAAAAGGACATGCATCCTAAAACCAGAAAGGCCCTATACAGCTTGGGGTTGAGGAAAGTATTCAGTGCTGTCTTTGTTAAGCCAAACGAGGGAATATTGGCCAAGCTGCAGAGAGTGGAACCATATGTTACATATGGATATCCAAATCTTAAAAGCATAAAGGAGGTAATTTACAAGAAGGGACATGCGAGAATAGATATGCGAAAAGTTCCTTTGACAGATAATAACATTGTTGAGCAGGAATTAGGAAAGTTTGGTATTCTATGCATAGAAGACATGGTGCATCAAATTGATAATATTGGTCCACACTTTAAGGAAGTTATCAGATTTTTGTGGCCCTTCGAGCTCAACAAGCCAGCAGAAGGATTGAAAGGATCGAAAGCCCTGTTCAAGGATGGTGGAGACACAGGGAACCGTGAGGATCTCATCAACGAACTAATCGATAAAATGAATTAA 891 0.4108 MLQLAASGSPALLFYFHIFGNLSLSFTHCYSFSTSHRRRLHHRPSYSSVDKMAEEDPKPLNFIPEVILKKRKSNAAYALRRKQQLQQKNFQSRKSKDFIKKPEDFIFEYRNKELDLIRLKRRVKRKLPELLTPSSKPLIVIRIQGKKDMHPKTRKALYSLGLRKVFSAVFVKPNEGILAKLQRVEPYVTYGYPNLKSIKEVIYKKGHARIDMRKVPLTDNNIVEQELGKFGILCIEDMVHQIDNIGPHFKEVIRFLWPFELNKPAEGLKGSKALFKDGGDTGNREDLINELIDKMN* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01663 296 Pfam Ribosomal protein L30p/L7e 138 188 IPR016082 -
Rops8g01663 296 PANTHER 60S RIBOSOMAL PROTEIN L7 60 296 IPR039699 -
Rops8g01663 296 FunFam 60S ribosomal protein L7 137 241 - -
Rops8g01663 296 Gene3D - 138 296 IPR036919 -
Rops8g01663 296 Pfam Ribosomal L30 N-terminal domain 63 126 IPR012988 -
Rops8g01663 296 NCBIfam 60S ribosomal protein uL30 64 296 IPR005998 GO:0000463|GO:0003735|GO:0022625
Rops8g01663 296 SUPERFAMILY Ribosomal protein L30p/L7e 139 296 IPR036919 -
Rops8g01663 296 CDD Ribosomal_L7_archeal_euk 138 296 IPR035808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01663 Rops-Chr8 37108690 37114860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01663 52 296 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 54.251 9.67e-84 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01663 K02937 - gmx:100500005 383.259