Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01662 ATGGCACTAAATAAGACAGGAAACTTGTTAGGTACCAACAACAGGAAGGACCCTGGCTTGCGTTCTCAATACAAACAACCAGAATTACCCAGCGGTGTTTCAAATACAGGACAGAATGTACATAATAATCTCTCTATTCAGACAGGGGAAAAATTGTCTGTGAATTTTGGTCATGATGGAATTGCTACTGGGAGAGTTCCTGCTTCACCTGATATATCTCGAAATCATGAGAATAGGTTTGGGTTGAATAGGGACAATAGTCATGTAAGATATGAAGATCTTACTAATATTTTGGGGTTGAGGAGAATGGACTCAGAGAGTTCTTCTGATATATCTGACTTTACCTCTATAAAACAGCCGGCACAGGAGATGGAAAATAGGGCTTCTGTAAAGATTTTGAGCAAAATTCAAAAGGGAGATGGTGATAGTGGCCATGCATCGAGGAAGTCTGTTTGTGAATCAATTGGCGACCAACCTGGTAATAGGTCAGCTGTACCAACTCATCGCAGAACTGAGTCTTCTCAGTCCAATGGATTTCCTGCTTCAGGAATTTTAGATGATTCTTTGTCTGGGAAAATGAAGTTTCTATGCAGCTTTGGTGGCAAAATATTACCGAGGCCCAGTGATGGGAAACTCAGATATGTAGGGGGAGATACCCACATTATATCTATTCGAAAGGATATTTCATGGGATGAGCTTGTGAAGAAGACCTTAAGGATTTGCAATCAACCTCACACAATCAAATACCAACTTCCAGGGGAGGATCTTGATGCTCTAATATCTGTTTCCTCTGATGAGGATCTTCAAAATATGATAGAGGAATACCACGGGCTTGAAAGTCATGAAGGTTCCCAAAAACTTAGAATTTTTTTAGTTCCTTTGGGTGAATCTGAAGAGACACCGTCAACTGAGGCAAGCACCATTATGCAGAATGATCCTGATTACCAATATGTTGTTGCTTTGAATGGTATGGTAGACTGTAGTCCCAGGAAAAACATTGGTGGGCAGAGTTTGACAAATGAAGCAAATCAACCCGGGACAAGTTTGAATTTTGCTCCAGTTTCCCAAAAAACTTCTCCAAATGTCCCTTCTCCTTTGGAGACCAGGGATGGTATTAATGTTTTGAATCCAGATGGAATTTTGAATGATTCCCTGAATCTGCAAAAACCCTCACCAATTTCTCCTACTCCAATTCAGGTTAAAGGTTCTAGCGCAGGTTATATACAATTGCTCGGTAACAACTCATGCCAGGGAAGTATTGAGAGCAACACATCATTTGCTACTGCTAAGATGCACCCTGAGAACTCCAGCATAAGCATTGCTGATTGCAGATACCCTCAACAAGTAGCTGTTAGCGACATTCATCCTTGTCAACAAGGTGATGTTGGTCAGCCCAAGAAGATCAATGGACAGTATTTTGACAACTACAATCCTGGCAAGGAATTAATGACTCCTGTATATGTTAACCCAAGTGATGGTTACCGTGATGAAGTTTTTGGTGGAAGGTACTTGCCTAAGGATAGAAGATTCTGCTCTGGAAATCCTCTTTCATGCTTGGATTATTCAATCTGTCAACAGGATGAATCTTATGGAATTACTGACTCCTCTCATGGGATGTCTCATGCCTTTTCTGATTCACAGTTGCAAGAGAGTGGAGCAAGGTCTGGTTACTGCTCACAAGAAGGAATTAGCCAATCTTGCTCCTTGAACCTCGAAAAGGCTCAATTATCTTCAATGTTAGCCTCTAATGTCTCACAAGTGAACCTTATGGAGGGTCAGAATGATTCCGTTCTCCGTCATCCTCAAATACAAAGTAAGATATCAAAAGTGGAGTCAGCTGAGCTGCACAGAAGGCAAGATTTGGCATCTTCTCTGTACACTGAAGCATCAGGAATGAATGATCCTATTCATAACGATGGCATTTCAACTGAAAAGAAGTACCTTATTCCTCAAACTGACTTAAGTGGATTTAGATTTGTAGCAAAGGATATTCATGAAAATTCTGCGAAATTAGAAAGCACAAAGATAATTGAAGAAAAAAATCTTATTCCCAAGAAGGATAGCAAGGTTTATGAGGGGAAATCATGTGCCGTTTATATGGGACAGGTGACTGGATCGCATCTTTTGGACTCCTTCCCTGCTAGTAACTTCAATGCTAAGATCAGCATGCAAAAGAATTGGGAACTACCTTTGGAGGAGATACATCCTTCATCATCAGGCATGATGGGACTCTCTCTAAATAATCTTGTTGACAAGACCTCGTCTGATCTTCTTGATGTGAGCCTAAAGACTAGTGATGGCAAGAAATGTGTTTTGGCTGAAGGTCTGAATGGTGAACAAGGAAAAGATTTTCCATTGACCAGAAATTTTGATTTAAATGCTCCAATTTCAAAACGTGAAGAAAGCTCTTGTGACAAAAGTTCTGTTAGGGATCATATGTTCAAGCCATCCATTGACCCAGATTCTCTTAAATCCGCACAAATTCAGCCTTCTCAGAATCAGAATGCTACAGGTTTTCATGATAATCCAACAGTAAGCTCTGAAAGTTTGTATCCTGCTGTACTTCATGATGATTTCGGTCCAAGTTTAAACTGGCCAGTGAATGGGCTGGATAATCTCAGCAAAAATATTTCTTTTAAAAAGGCACCTTTTTTTGATGACTTGATTATCAGCACTGATAAAAGGGTTGATCAGTTTATCGATGAACACTCTGCCACTGGACAGTCAAAAGTTGAAGATATAATCTCGGGACAATCAAAAAATTTAGAAAGGTGTAATGATACAAATCGAGTGGAGCCATTTGTCATGGTAGAAGACGTGACTGGTGTTGTACCTCCAAATATTGAGTCTTCATCTGTATGCTCCCCACATATTTTGGATGAATTTGTAAGTGATGTATCTCCATCTTATACGGAATCAGAGAGCATCATCCCCGAGTATGAACCTGAGGATTTTAAAGACGATCAAACGGACAAGAGTGAATTCCTTTCTGATGCAATGATAGCAGAAATGGAAGCCAGCATATACGGTTTGCAGATAATAAGGAATGCTGATCTTGAAGATCTTATGGAATTAGGATCTGGTACTTATGGAACCGTTTATCATGGAAAATGGCGGGGAACAGATGTTGCTATTAAGAGAATTAAAAAGAGCTGCTTTGCAGGGAGATCTTCTGAGCAAGAACGGTTGGCAAAAGATTTCTGGAGAGAAGCACAGATCCTCTCAAATCTTCATCATCCTAATGTGCTTGCATTTTATGGAATAGTACCAGATGGGGCTGGTGGAACCTTAGCAACTGTAACAGAGTATATGGTTAATGGTTCCCTTAGGCATGTCCTTGTCAAGAACCACAGATTATTAGATCGTCGCAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCACTCAAAAAATATTGTCCATTTTGATTTGAAATGTGACAATTTGCTGGTCAATCTAAGGGATCCACAACGACCCATATGCAAGGTCGGAGATTTTGGATTATCAAGAATTAAACGTAATACCCTTGTGTCTGGGGGTGTGCGTGGAACCCTTCCATGGATGGCACCAGAGCTGTTGAATGGTAATAGCAGCCGGGTTTCTGAAAAGGTTGATGTTTTCTCATTTGGCATCTCCATGTGGGAGTTATTGACAGGGGAGGAACCTTATGCAGATATGCATTGTGGTGCCATTATTGGGGGCATTGTAAAGAACACTCTTCGACCACCTGTTCCAGAACGCTGTGATCTCGAATGGAAGAAGCTTATGGAAGAGTGTTGGTCACCTGATCCCGAAAGCCGGCCATCATTCTCAGAGATAACTAGCAGGTTAAGATCTATGTCTATGGCCCTTCAAGCTAAGGGGAACCATCATCCATGGCAGTTAAGACATGGTGCTTCTTGA 3918 0.4076 MALNKTGNLLGTNNRKDPGLRSQYKQPELPSGVSNTGQNVHNNLSIQTGEKLSVNFGHDGIATGRVPASPDISRNHENRFGLNRDNSHVRYEDLTNILGLRRMDSESSSDISDFTSIKQPAQEMENRASVKILSKIQKGDGDSGHASRKSVCESIGDQPGNRSAVPTHRRTESSQSNGFPASGILDDSLSGKMKFLCSFGGKILPRPSDGKLRYVGGDTHIISIRKDISWDELVKKTLRICNQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEYHGLESHEGSQKLRIFLVPLGESEETPSTEASTIMQNDPDYQYVVALNGMVDCSPRKNIGGQSLTNEANQPGTSLNFAPVSQKTSPNVPSPLETRDGINVLNPDGILNDSLNLQKPSPISPTPIQVKGSSAGYIQLLGNNSCQGSIESNTSFATAKMHPENSSISIADCRYPQQVAVSDIHPCQQGDVGQPKKINGQYFDNYNPGKELMTPVYVNPSDGYRDEVFGGRYLPKDRRFCSGNPLSCLDYSICQQDESYGITDSSHGMSHAFSDSQLQESGARSGYCSQEGISQSCSLNLEKAQLSSMLASNVSQVNLMEGQNDSVLRHPQIQSKISKVESAELHRRQDLASSLYTEASGMNDPIHNDGISTEKKYLIPQTDLSGFRFVAKDIHENSAKLESTKIIEEKNLIPKKDSKVYEGKSCAVYMGQVTGSHLLDSFPASNFNAKISMQKNWELPLEEIHPSSSGMMGLSLNNLVDKTSSDLLDVSLKTSDGKKCVLAEGLNGEQGKDFPLTRNFDLNAPISKREESSCDKSSVRDHMFKPSIDPDSLKSAQIQPSQNQNATGFHDNPTVSSESLYPAVLHDDFGPSLNWPVNGLDNLSKNISFKKAPFFDDLIISTDKRVDQFIDEHSATGQSKVEDIISGQSKNLERCNDTNRVEPFVMVEDVTGVVPPNIESSSVCSPHILDEFVSDVSPSYTESESIIPEYEPEDFKDDQTDKSEFLSDAMIAEMEASIYGLQIIRNADLEDLMELGSGTYGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLAKDFWREAQILSNLHHPNVLAFYGIVPDGAGGTLATVTEYMVNGSLRHVLVKNHRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPVPERCDLEWKKLMEECWSPDPESRPSFSEITSRLRSMSMALQAKGNHHPWQLRHGAS* 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01662 1305 Gene3D Transferase(Phosphotransferase) domain 1 1107 1301 - -
Rops8g01662 1305 MobiDBLite consensus disorder prediction 1 20 - -
Rops8g01662 1305 Gene3D - 211 293 - -
Rops8g01662 1305 MobiDBLite consensus disorder prediction 27 41 - -
Rops8g01662 1305 Pfam Protein tyrosine and serine/threonine kinase 1023 1282 IPR001245 GO:0004672|GO:0006468
Rops8g01662 1305 SUPERFAMILY Protein kinase-like (PK-like) 1007 1281 IPR011009 -
Rops8g01662 1305 SMART PB1_new 207 294 IPR000270 GO:0005515
Rops8g01662 1305 MobiDBLite consensus disorder prediction 1 41 - -
Rops8g01662 1305 SUPERFAMILY CAD & PB1 domains 208 295 - -
Rops8g01662 1305 ProSitePatterns Protein kinases ATP-binding region signature. 1025 1050 IPR017441 GO:0005524
Rops8g01662 1305 PANTHER SERINE-THREONINE PROTEIN KINASE 242 1285 - -
Rops8g01662 1305 PRINTS Tyrosine kinase catalytic domain signature 1138 1156 IPR001245 GO:0004672|GO:0006468
Rops8g01662 1305 PRINTS Tyrosine kinase catalytic domain signature 1209 1231 IPR001245 GO:0004672|GO:0006468
Rops8g01662 1305 PRINTS Tyrosine kinase catalytic domain signature 1101 1114 IPR001245 GO:0004672|GO:0006468
Rops8g01662 1305 PRINTS Tyrosine kinase catalytic domain signature 1253 1275 IPR001245 GO:0004672|GO:0006468
Rops8g01662 1305 MobiDBLite consensus disorder prediction 337 366 - -
Rops8g01662 1305 MobiDBLite consensus disorder prediction 822 843 - -
Rops8g01662 1305 Pfam PB1 domain 209 293 IPR000270 GO:0005515
Rops8g01662 1305 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1012 1106 - -
Rops8g01662 1305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1144 1156 IPR008271 GO:0004672|GO:0006468
Rops8g01662 1305 CDD PB1_UP2 196 291 - -
Rops8g01662 1305 Gene3D Phosphorylase Kinase; domain 1 1012 1106 - -
Rops8g01662 1305 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1107 1298 - -
Rops8g01662 1305 MobiDBLite consensus disorder prediction 137 183 - -
Rops8g01662 1305 MobiDBLite consensus disorder prediction 801 843 - -
Rops8g01662 1305 SMART serkin_6 1019 1288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01662 1305 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Rops8g01662 1305 MobiDBLite consensus disorder prediction 801 818 - -
Rops8g01662 1305 CDD STKc_MAP3K-like 1025 1282 - -
Rops8g01662 1305 MobiDBLite consensus disorder prediction 154 183 - -
Rops8g01662 1305 MobiDBLite consensus disorder prediction 337 368 - -
Rops8g01662 1305 ProSiteProfiles Protein kinase domain profile. 1019 1299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01662 Rops-Chr8 37087916 37105156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01662 189 477 MAP Kinase Kinase Kinase AT1G16270 39.228 6.18e-43 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Rops8g01662 PK_Tyr_Ser-Thr 5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01662 - - aprc:113862751 1868.59