Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01648 ATGGAAGCTCAAGCTGAAATTGTGTCTAAGCAAATCATAAAGCCATCCTCTCCATCCTCTCCTCATCTCAAAGTTTTCAAACTCTCATTTCTTGATCAATTGGGGCCTGAAGCTTATGTTCCTGCTTTCCTCTTCTACTCTGCACATGAAGTTACTGGTTCTGGCCTTGATTTTCCATCCTTGAATGGAAAACTGAAGGCTTCCCTTTCAGATGTGCTGTCTCTTTACTACCCTTTTAGTGGAAGGGTCAAAGGGAATGTCTATGTTGAGTGCAATGATGCAGGTGTGCTTTACATTGAGGCCAAAGTACCCATCACACTCAATGATATCCAACAATATGCACAGGTCAATGCTTTGAAACAGTTTCTCCCAATTGATCCAGAAAGTGGGTGTGTGAACAATGAGGAACAAGTACTCATGGGGGTTCAGGTTAGTGAACTAAGTTGTGGTGCTGTAGGAATTGGTGTGTGCATCTCACACAAGGTTGCTGATGGCATTGCCTTGTGTTCTTTCCTCAATGCTTGGGTTGCAACAGCAAAGGGAAGTGGTGGTAACACAACTAAGCCTTATATGGAAGGAAGTTTGCTTTTCCCAACAATTGACAACAATTTTTCTAGTCCATTATGTGGTCGTGTTCATATTGAAAAAGATATTGTGGCAACAAGGTTTGTTTTTGATGGGGCAAGCTTGTCAAGGCTAAAAGCTGAAATGGGTAGTGACAATTTCACAAGGGTTGAAGCTGTGACAGCTCTTATATGGAAGTCAATGATGGAGGCAACAATAGCAAATTCAAGTGAGCAAAATCTTATTATAAGGTCCCTTGCAACACATATTGTGAACATCCGAGGACGATTGGTGCCACCTTTGCCAGAGTATTCCATGGGAAATGTTTGTCAACTTGCTGTTACTCCATTGGTTGAGTTCCAAGTTGGAAACAAGGTTGAGTTGAGGGATTTGGCATTGATGGTTAGGAAAGGCATAATGAAATATGATAAAGATTATGTTAGTAAACTTGTGGGTGATGGTGGTTTTGATTTGGTGGTGGAATCCTTTAAACAAATAATGCCATCCAACACCAAGGGTGTTGTTCTATGGTGTGACTTTACTAGTTGGGCTAGATTTCCTTTATATGAAGCTGATTTTGGGTGGGGAAAACCAACATGGGCTGGTAGTATTATTTTGCCAGTGGAAAATGCTGTCTTGTTGTTGCCCACTAGAAATGGGGAAGGAATTGAGGCTTGGGTTAACATTACTAAACAAGATATGGCCCAATTTAGGTGCAACCCAAAAATTCTACAATATGCTTCAGTGTCACTTGCTTCTCCCTAA 1329 0.4123 MEAQAEIVSKQIIKPSSPSSPHLKVFKLSFLDQLGPEAYVPAFLFYSAHEVTGSGLDFPSLNGKLKASLSDVLSLYYPFSGRVKGNVYVECNDAGVLYIEAKVPITLNDIQQYAQVNALKQFLPIDPESGCVNNEEQVLMGVQVSELSCGAVGIGVCISHKVADGIALCSFLNAWVATAKGSGGNTTKPYMEGSLLFPTIDNNFSSPLCGRVHIEKDIVATRFVFDGASLSRLKAEMGSDNFTRVEAVTALIWKSMMEATIANSSEQNLIIRSLATHIVNIRGRLVPPLPEYSMGNVCQLAVTPLVEFQVGNKVELRDLALMVRKGIMKYDKDYVSKLVGDGGFDLVVESFKQIMPSNTKGVVLWCDFTSWARFPLYEADFGWGKPTWAGSIILPVENAVLLLPTRNGEGIEAWVNITKQDMAQFRCNPKILQYASVSLASP* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01648 442 Pfam Transferase family 5 428 - -
Rops8g01648 442 Gene3D - 3 206 IPR023213 -
Rops8g01648 442 PANTHER F21J9.9 6 436 - -
Rops8g01648 442 Gene3D - 216 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01648 Rops-Chr8 36835559 36836887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01648 29 410 Monolignol Biosynthesis Gene Families AT5G48930 26.150 1.13e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01648 - K13065 rcu:8287863 361.688