Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01647 ATGTGTCACGAAGAAACCCGGCAGCAAAGCAACAATGAGAATGCAAGGAAGGGGGACCCAAAGAAATACCCTTATAGCTGTGTTCCCTGCCCAGGGTTTCGCGAGGGGGGGTCTACCAAAGAGGAGGGTCCTTGTGAGTATGCACTTGGTGTTTCGGAACCCGAGGAACTTCGTGCCCCCTTCGAGCGTTTTGGACCTGTTCGTGATGTCTACATTCCTAAAGACTATTATTCTGGGCAACCCCGAGGCTTTATCTCATTCAAGCTTTGGAATCTTTCAGCAGTTTCATTCATGTCTGCTAAATCAGGTTTTTCAGACTTCAACTTTCCTACAGGGAACAGAGGGAGTCAAACCTCGCTTGCATCTGAAACCGGGGCATCAACTGATTATAGGAGCAAGTTTCCATACATGGAGAGCAAAGTGTCAGATTCAGCTCAAGCTTGCCATCCTCGAAGACAAGCTCATCGATCAGGGGGTACACTGATCGTCGAGAAACTCCAGGAGGCGCGGAATAACTTAGAAGTCGCGGCTGCTGTTGAGGAGACTGACGGAACAGCTGTTTCTGAGATGAAGGCTTCTGAAGCACGGACTCACCAAAGGCTGCCACTAATTTACGTGAAACTCCATATGTACCAGATTTTCAGGGGGTTGGCTTATATCCACTCTGTTCCTGGAGTTTGCCACAGAGATTTGAAGCCTCAAAATATACTGGTTGATCCTTTTGCACACCAAGTTAAGCTATGTGATTTTGGAAGTGCGAAAATGCTAGTCAAAGGTGAAGCTAACCTATCATACACATGTTCACGTTTCTGTCGAGCTCCAGAACTCATCTTTGGTGCCACAGAGTATACTACTTCAATTGATATTTGGTCTACTGGTTGTGTCCTTGCCGAACTGCTTTTGGGCCAGCCATTATTCCCTGGTGAAAATGCAGTGGACCTATTAAGGGTGGTGGTATCCAAGTTAGGACCCAAAAGGGATTTTCCTTTGGCTTCGAGGAGTTTGAAGTGGCAAGGGCTGTGCAAAGTGCACTCGAGGCGTCACCAATTCTGA 1053 0.4739 MCHEETRQQSNNENARKGDPKKYPYSCVPCPGFREGGSTKEEGPCEYALGVSEPEELRAPFERFGPVRDVYIPKDYYSGQPRGFISFKLWNLSAVSFMSAKSGFSDFNFPTGNRGSQTSLASETGASTDYRSKFPYMESKVSDSAQACHPRRQAHRSGGTLIVEKLQEARNNLEVAAAVEETDGTAVSEMKASEARTHQRLPLIYVKLHMYQIFRGLAYIHSVPGVCHRDLKPQNILVDPFAHQVKLCDFGSAKMLVKGEANLSYTCSRFCRAPELIFGATEYTTSIDIWSTGCVLAELLLGQPLFPGENAVDLLRVVVSKLGPKRDFPLASRSLKWQGLCKVHSRRHQF* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01647 350 MobiDBLite consensus disorder prediction 1 20 - -
Rops8g01647 350 Gene3D Transferase(Phosphotransferase) domain 1 186 347 - -
Rops8g01647 350 ProSiteProfiles Protein kinase domain profile. 56 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01647 350 SUPERFAMILY Protein kinase-like (PK-like) 196 325 IPR011009 -
Rops8g01647 350 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 186 323 - -
Rops8g01647 350 Coils Coil 163 183 - -
Rops8g01647 350 SUPERFAMILY RNA-binding domain, RBD 54 84 IPR035979 GO:0003676
Rops8g01647 350 SMART serkin_6 155 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01647 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Rops8g01647 350 Gene3D - 51 102 IPR012677 -
Rops8g01647 350 MobiDBLite consensus disorder prediction 1 24 - -
Rops8g01647 350 Pfam Protein kinase domain 197 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01647 350 FunFam Mitogen-activated protein kinase 195 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01647 Rops-Chr8 36783627 36785199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01647 161 323 MAP Kinase Gene Family AT2G43790 37.423 8.83e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Rops8g01647 Pkinase 1.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01647 K14502 - qsu:112026990 229.565