Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01646 ATGAGTTGCTTTTCATGTTTTTCTTCCCACGAAAAGAAAGTGGCAAAGAAGCCTAACAATGAAAAGAGGGTACATTCGCCTGCTACTCAATCTCCTAAAGAAGCAGCCCAACCTCATCCAGAGAATCATCTTCATCAGGCAAGGGCCAACCCACAAACAGATCCTAAAACTAATAAGGAGGCCAATAAAGATACAAACAGTAACATTGCTGCCCAAACGTTCACCTTCAGGGAATTGGCTGCTATCACAAAGAACTTTAGGCAGGAATGTCTAATAGGTGAAGGTGGATTTGGAAGAGTTTATAGAGGAAGACTTGAAAAAACCAACCAGGAAGTAGCTGTGAAGCAACTTGACAGGAATGGATTGCAAGGGAACAGAGAGTTTCTTGTTGAAGTGTTAATGTTGAGCCTCTTGCACCATCAAAATCTAGTGAATCTAGTTGGATATTGTGCTGATGGAGATCAGAGACTATTGGTGTATGAGTACATGCCTATGGGATCTGTTGAGGACCATCTACTTGATCTTGATCCACAACAAAAGCCTCTAGATTGGTTCATCAGAATGAAAATAGCTTTGGATGCTGCAAAAGGTCTAGAATATTTGCATGACAAGGCCAATCCTCCAGTTATCTACCGAGACTTAAAATCCTCCAACATCTTGCTAGACAATGATTTCAATGCAAAACTCTCTGATTTTGGACTAGCCAAACTGGGACCTACAGGGGACAAGTCTCATGTCTCTTCAAGAGTTATGGGTACTTATGGATACTGTGCCCCTGAGTATCAAAGAACTGGTCAACTCACCGTAAAATCAGATGTATACAGCTTTGGAGTTGTTTTGCTTGAATTGATCACTGGAAGGAGAGCCATTGACAACACAAGACCAGCACGGGAGCAAAATCTAGTTTCTTGGGCATATCCAGTATTCAGGGACCCTCATAGATACCCAGAATTAGCAGATCCCCTTCTTCATGGAAACTTCCCAATGAGATCACTGCATCAAGCAGTGGCAGTAGCAGCCATGTGCCTCAATGAGGAACCATCAGTGAGGCCCTTGATCAGTGATGTTGTCACTGCTCTTAGTTTCCTTGGGACAAATCCAGGGGCTCAAGGAACTTCACCCATTGACATGCCCTCTCCACCACCAGAGCAAGAAAATAGCAGTGCCCCTTTGAATCTTCTTGATGATGACAGTGCCATGGAACGCCAAAGAGCAGTTGCTGAAGCCATGGAATGGGGTTCAAATACTAGAAACAACACACAAAGTGCAGCATCCTCTTTGTAA 1284 0.4346 MSCFSCFSSHEKKVAKKPNNEKRVHSPATQSPKEAAQPHPENHLHQARANPQTDPKTNKEANKDTNSNIAAQTFTFRELAAITKNFRQECLIGEGGFGRVYRGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLVGYCADGDQRLLVYEYMPMGSVEDHLLDLDPQQKPLDWFIRMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDNDFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGRRAIDNTRPAREQNLVSWAYPVFRDPHRYPELADPLLHGNFPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLGTNPGAQGTSPIDMPSPPPEQENSSAPLNLLDDDSAMERQRAVAEAMEWGSNTRNNTQSAASSL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01646 427 CDD STKc_IRAK 92 360 - -
Rops8g01646 427 MobiDBLite consensus disorder prediction 1 68 - -
Rops8g01646 427 MobiDBLite consensus disorder prediction 46 68 - -
Rops8g01646 427 Gene3D Phosphorylase Kinase; domain 1 56 162 - -
Rops8g01646 427 FunFam Serine/threonine-protein kinase PBS1 57 162 - -
Rops8g01646 427 SUPERFAMILY Protein kinase-like (PK-like) 72 385 IPR011009 -
Rops8g01646 427 FunFam Serine/threonine-protein kinase PBS1 163 375 - -
Rops8g01646 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Rops8g01646 427 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Rops8g01646 427 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01646 427 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01646 427 MobiDBLite consensus disorder prediction 365 427 - -
Rops8g01646 427 Gene3D Transferase(Phosphotransferase) domain 1 163 369 - -
Rops8g01646 427 PANTHER OS07G0668900 PROTEIN 3 369 - -
Rops8g01646 427 MobiDBLite consensus disorder prediction 412 427 - -
Rops8g01646 427 Pfam Protein kinase domain 88 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01646 Rops-Chr8 36737544 36741051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01646 1 426 Glycoside Hydrolase AT3G07070 67.366 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Rops8g01646 Pkinase 7.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01646 - - gmx:100786405 725.702