Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01644 ATGAACATGCCTTTCTCAATTTCACTCTTTTTTCTAATCTTGCTATTTACTTTCCAATCTTCGTCTTCTTTATCATCATTGAACAAGGGTTCCTCCCTCTTAGCGGAGAAACATGTAGAAGACTTTATTGTCTCCCAAAATGGCATGTTCAAAGCTGGCTTCTTTCAAGTTGGTGAAAATGTCTACTTCTTTGCCATATGGTTCACTGAACCTCACAATCACAACCCCGCCACCGTTGTTTGGATGGCAAACCGTGATCAACCCATTAATGGAAAACACTCAAAGCTTTCCCTCTTACATGATGGTAACATTATCTTGGTTGATGCAGGTCAATTCAGAGCTTGGTCTTCAAACACTGAATCAAACGACCCAGTAGAGTTATACCTCAAAGATGATGGTAATCTTGTGTTACGTGAGTTGCAAGGAACCATTTTGTGGCAAAGCTTTGATTTCCCAACTGATACTCTCCTTCCTGGTCAACCTCTTACTAGATATACACATCTTGTGTCTTCAAGAAGCAAGGGTAACTATTCTTCTGGTTTCTATAAGCTGCTCTTTGATGATGACAACGTTCTTCGTCTTGTTTATGATGGTCCTGATGTTTCAAGTACATATTGGCCATCACCTTGGAAAATTAGTTGGGAAGTTGGAAGGTTTAGTTACAATAGTAGTAGAGTTGTGGTGTTAAATTCTCTTGGAAATTTCATTTCATCAGATAATTATTCTTTTTCCACTTATGATTATGGCATGGTGATGCAGAGAAGATTAACCTTGGATTATGATGGTAATGTTCGAGTGTACAGTAGAAATGATGTGTCAAAGAAATGGTATGTTTCATGGCAAGTCATATCTGACCCTTGCACCATTCATGGGATTTGTGGAGCTAATAGCACTTGCAATTATGATCCTAAAAAAGGAAGGAAATGTTCATGTTTACCAGGGTACAAAGTGAAGAACCATAGTGATTGGTCTTATGGGTGTGAACCCATGTTTGATTTTATTTGCAATAGAACTGAGTCTACCTTTTGGGAGATGCAGGGTGTTGAGCTCTACGGTTATGACAGCAGGTATGTCCCTAACAATACCTACAAAAATTGTGAGAATTTATGTCTACAAGATTGCAACTGTAAAGGGTTCCAGGTCAAATTTGAGGAGGACAACAATGGCAAATTAATCTATAAATGCTTTCCAAAAATACAGTTGCTGAATGGGAGGCGTTCACCACCTTTTAAAGGAGCAACTTACTTGAGACTGCCTAAAGTTGGAGCTTTAGAATTGGTTTGCTTTTTGGTGGTTTGGGGTTTCTTAATTAGGACCCACCAAAAGTCTGATGCAGATAAGCATGGTTATCATCTTACAGCTGTGGGATTCATAACATTTAGTTACTCTCAGTTGAAAAAGGCCACAAAGGGGTTCAGTCAAGAGATTGGAAGGGGTGCAGGAGGGGTTGTATACAAAGGTCTTTTGTCAGATCAAAGACATGCTGCAATAAAAAGGCTCAATGAAGCTACACCTACACAAGGAGAAAGGGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGCAAGCACAGGCTTTTGGTATATGAGTACATGGAAAATGGTTCTTTGGCTGAAAATCTCTCCTCCAACACACTTGATTGGAGTAAGAGGTATGATATTGCTCTTGGAACAGCTAGAGGTTTAGCTTATCTACATGAAGAATGCCTGGAATGGATTTTGCACTGTGATATAAAGCCTCAAAACATACTTCTTGATTCCAACTATCAGCCCAAGGTTGCAGATTTTGGCTTGTCTAAGCTAATAAGCAGAAACAACCTCAATAAAAACTCAAGCCTCTCAATGATCAGAGGGACTAGAGGATATATGGCACCTGAATGGTTTTTCAATTTAGCAATAACCTCCAAAGTGGATGTTTACAGCTATGGAATTGTTCTCTTGGAGATGATAACTGGCAAGAGTCCAACAATGGATATAGAAACAGTTCATGGATCTGAGGCATATAATGGAAGGCTGGTAACATGGGTCAGAGAGAAAAAGAGGAGCCCATCTTGGATGGAGCAAATCATGGATCCTGCAATGGGGACAAATCATGATGTAAATCAGATGGAAATTTTGGCTAGAGTTGCTTTGGACTGTGTGGAGGAAGACAAAGATATAAGGCCAAACATGAGCCAAGTGGTTGAGATGCTTCAAAGCCATGAAACAGATGTTCAGTGA 2265 0.3978 MNMPFSISLFFLILLFTFQSSSSLSSLNKGSSLLAEKHVEDFIVSQNGMFKAGFFQVGENVYFFAIWFTEPHNHNPATVVWMANRDQPINGKHSKLSLLHDGNIILVDAGQFRAWSSNTESNDPVELYLKDDGNLVLRELQGTILWQSFDFPTDTLLPGQPLTRYTHLVSSRSKGNYSSGFYKLLFDDDNVLRLVYDGPDVSSTYWPSPWKISWEVGRFSYNSSRVVVLNSLGNFISSDNYSFSTYDYGMVMQRRLTLDYDGNVRVYSRNDVSKKWYVSWQVISDPCTIHGICGANSTCNYDPKKGRKCSCLPGYKVKNHSDWSYGCEPMFDFICNRTESTFWEMQGVELYGYDSRYVPNNTYKNCENLCLQDCNCKGFQVKFEEDNNGKLIYKCFPKIQLLNGRRSPPFKGATYLRLPKVGALELVCFLVVWGFLIRTHQKSDADKHGYHLTAVGFITFSYSQLKKATKGFSQEIGRGAGGVVYKGLLSDQRHAAIKRLNEATPTQGEREFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDWSKRYDIALGTARGLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLISRNNLNKNSSLSMIRGTRGYMAPEWFFNLAITSKVDVYSYGIVLLEMITGKSPTMDIETVHGSEAYNGRLVTWVREKKRSPSWMEQIMDPAMGTNHDVNQMEILARVALDCVEEDKDIRPNMSQVVEMLQSHETDVQ* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01644 754 CDD PAN_AP_plant 335 419 - -
Rops8g01644 754 CDD STKc_IRAK 476 747 - -
Rops8g01644 754 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 209 IPR036426 -
Rops8g01644 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Rops8g01644 754 FunFam Putative receptor-like protein kinase 547 754 - -
Rops8g01644 754 PIRSF SRK 1 754 IPR024171 GO:0004674
Rops8g01644 754 CDD EGF 286 320 - -
Rops8g01644 754 Pfam PAN-like domain 335 382 IPR003609 -
Rops8g01644 754 ProSiteProfiles PAN/Apple domain profile. 335 428 IPR003609 -
Rops8g01644 754 ProSiteProfiles EGF-like domain profile. 283 321 IPR000742 -
Rops8g01644 754 ProSiteProfiles Bulb-type lectin domain profile. 18 150 IPR001480 -
Rops8g01644 754 Pfam Protein kinase domain 473 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01644 754 Gene3D Phosphorylase Kinase; domain 1 436 546 - -
Rops8g01644 754 CDD B_lectin 42 152 IPR001480 -
Rops8g01644 754 Pfam S-locus glycoprotein domain 229 318 IPR000858 GO:0048544
Rops8g01644 754 ProSitePatterns Protein kinases ATP-binding region signature. 476 498 IPR017441 GO:0005524
Rops8g01644 754 SUPERFAMILY Protein kinase-like (PK-like) 450 747 IPR011009 -
Rops8g01644 754 SMART serkin_6 470 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01644 754 Gene3D Transferase(Phosphotransferase) domain 1 547 754 - -
Rops8g01644 754 PANTHER OS07G0415500 PROTEIN 6 750 - -
Rops8g01644 754 FunFam S-receptor-like serine/threonine-protein kinase 439 546 - -
Rops8g01644 754 Pfam D-mannose binding lectin 78 164 IPR001480 -
Rops8g01644 754 FunFam Serine/threonine-protein kinase 153 280 - -
Rops8g01644 754 Gene3D - 21 150 IPR036426 -
Rops8g01644 754 SMART blect_4 31 152 IPR001480 -
Rops8g01644 754 ProSiteProfiles Protein kinase domain profile. 470 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01644 754 Gene3D - 151 279 IPR036426 -
Rops8g01644 754 FunFam Putative receptor protein kinase ZmPK1 21 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01644 Rops-Chr8 36719520 36722174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01644 437 753 Trihelix Transcription Factor Family AT5G38560 40.964 8.50e-67 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops8g01644 Pkinase 7.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01644 - - gmx:100785351 1114.37