Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01641 ATGAACATGGCTTTGTCAACCACACTGTTTCTTCTAGCATTGGCCATGTCTTTCCAATGTTCATCTTCTACTTTATCATCATTGGGAAAGGGATCCTCCCTTTCAGTGGAAAAACCACAAGACATTATCATCTCACCAAATGGCATGTTCTCTGCTGGCTTTTTTCCCATTGGTGAAAACGCATATTCATTTGCCATATGGTTCACTGAGCCTCATTTCCACAACCCCACTTCAATAATTTGGATGGCAAGCCGTGACCAACCTGTGAATGGAAAGCATTCAAAGCTTTCTCTCTTACACAATGCTAACATTGTCTTGGTTGATGCTGCTATAAACAAAGTTTGGTCTTCAAACACTGTATCATTAGCCCCAGTAGAGTTGCATCTCAAAGATGATGGCAATCTTGTGTTACATGAGTTGCAAGGAACCATTCTGTGGCAAAGTTTTGATTTTCCAACAGATACTCTTCTCCCTGGTCAACCTCTTACTAGATATACACAACTTGTGTCTGCAAGAAGTGAGAGTAACCATTCCTCTGGCTTCTATATGTTCTACTTTGATGATGACAATGTTCTTGGTATTCACTATAATGGTCCTGATGTTTCAAGCAGTTATTGGCCAAAAGCTTGGCTACTAAGTTGGGATGTTGGAAGGTCTAATTTTAATAGTAGCAGAGTTGCAGTGTTAAATTCTCTTGGACTTTTCAATTCATCAGATAATTTCACTTTTATAACATCTGATTATGGCACGGAGCTGCAAAGAAGATTGAAGATGGATTTTGATGGTAATGTTCGTGTGTACAGTAGGAATAATGTGTCAGAGAAATGGTATATTTCATGGCAAGCCATTTCTAATGCTTGCATCGTTCATGGGATTTGTGGAGCCAATAGTACATGTAGTAATGATCCTCAAAATGGAAGAAAATGCTCATGTGTTCCAGGGTATAGAGTAAAGAACCATAGTGATTGGTCTTATGGGTGTGAACCCATGTTTGATCTTAATTGCAATAGAAATGAGTCTATGTTCTTAGAGATGCCAGGTGTTGAGTTTTATGGCTATGACAACCATTATGTTGAAGTTAGTAACTATAGTGCTTGTGAGAATTTATGTTTAAGAGACTGTAATTGTAAAGGGTTTCAGCATTCATATAGTGTAAAAAACGGTTTTGCTAGGTGCTACACAAAGACACAATTGCTCAATGGAAGACGTGCACCATTCTTCAAAGGAACAACCTACTTGAGATTGCCTAAAAGTAATAGCTTCTCTGATGAAGAAGAATCTGCCACTCCATATGACCATGTTTGTTCAGTGCAACTTCAGAGACTTTATATCAGAACAAGTTCCAACCATTTGGTGAAGATTTTCCTGTGGTTTGCTACTGCAGTTGGAGCTTTTGAAATGATTTGCATCTTAATAGTTTGGTGTTCCCTAATTAGGTCCCGCCAAAAGTGTGATACAGAACAACATGGCTACCATCTTACAGCAATGGGGTTCAGAAAATTTAGCTACTCTGAGCTAAAAAAAGCAACAAAAGGGTTCAGTCAAGAGATTGGAAGAGGTGCAGGAGGGGTTGTGTACAAAGGCCAATTATCTGATCAAAGACATGCAGCAATAAAGAGACTTTATAATGCTAAACAAGAAGAGGAATTTCTTGCTGAAGTAGGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAAGGCAAGCACAGGCTTTTGGTGTATGAGTACATGGAAAACGGTTCTTTGGCTGAAAATCTCTCCTCCAACACACTTGATTGGAGTAAGAGGTATAAAATTTCTGTTGGAACAGCTAGAGTTCTAGCATATCTACATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCACAAAATATACTTTTGGATTCTAACTTCCAGCCCAAGTTAGCAGATTTTGGCTTGTCTAAGCTAATAAGCAGAAATAACCTCCACAATTCAAGCATCTCTATGATAAGAGGAACCAGAGGATATATGGCACCTGAGTGGGTTTTTAACTTGCCCATTACATCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTCTTGGAATTGATAACAGGAAAGAGCCCAACAACAGGTATCCAAACAGTTGATGGAGAAGAGGCATATGAGAGGTTGGTTACATGGGTGAGAGAAAAATGGAACAGTAAATATGGGGTGGAGCAAATTATTGATCCAGCAATTGGACCAAATTATGATAAAAGTAAGATGGAAATTTTGGTTAGAGTGGCTTTGGATTGTGTAGTAGAAGACAGAGATTCAAGACCCACCATGAGTAAAGTAGAGGAGATGCTTCAATGCCATGGAAGTGATCCTTAG 2370 0.3899 MNMALSTTLFLLALAMSFQCSSSTLSSLGKGSSLSVEKPQDIIISPNGMFSAGFFPIGENAYSFAIWFTEPHFHNPTSIIWMASRDQPVNGKHSKLSLLHNANIVLVDAAINKVWSSNTVSLAPVELHLKDDGNLVLHELQGTILWQSFDFPTDTLLPGQPLTRYTQLVSARSESNHSSGFYMFYFDDDNVLGIHYNGPDVSSSYWPKAWLLSWDVGRSNFNSSRVAVLNSLGLFNSSDNFTFITSDYGTELQRRLKMDFDGNVRVYSRNNVSEKWYISWQAISNACIVHGICGANSTCSNDPQNGRKCSCVPGYRVKNHSDWSYGCEPMFDLNCNRNESMFLEMPGVEFYGYDNHYVEVSNYSACENLCLRDCNCKGFQHSYSVKNGFARCYTKTQLLNGRRAPFFKGTTYLRLPKSNSFSDEEESATPYDHVCSVQLQRLYIRTSSNHLVKIFLWFATAVGAFEMICILIVWCSLIRSRQKCDTEQHGYHLTAMGFRKFSYSELKKATKGFSQEIGRGAGGVVYKGQLSDQRHAAIKRLYNAKQEEEFLAEVGIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDWSKRYKISVGTARVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLISRNNLHNSSISMIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLELITGKSPTTGIQTVDGEEAYERLVTWVREKWNSKYGVEQIIDPAIGPNYDKSKMEILVRVALDCVVEDRDSRPTMSKVEEMLQCHGSDP* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01641 789 FunFam S-receptor-like serine/threonine-protein kinase 480 584 - -
Rops8g01641 789 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Rops8g01641 789 FunFam Putative receptor-like protein kinase 585 788 - -
Rops8g01641 789 Gene3D - 23 150 IPR036426 -
Rops8g01641 789 SMART serkin_6 511 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01641 789 CDD STKc_IRAK 517 783 - -
Rops8g01641 789 ProSiteProfiles PAN/Apple domain profile. 335 411 IPR003609 -
Rops8g01641 789 CDD PAN_AP_plant 331 416 - -
Rops8g01641 789 Pfam PAN-like domain 335 398 IPR003609 -
Rops8g01641 789 CDD B_lectin 45 152 IPR001480 -
Rops8g01641 789 FunFam Putative receptor protein kinase ZmPK1 22 151 - -
Rops8g01641 789 Pfam S-locus glycoprotein domain 238 318 IPR000858 GO:0048544
Rops8g01641 789 Pfam D-mannose binding lectin 79 164 IPR001480 -
Rops8g01641 789 ProSiteProfiles EGF-like domain profile. 283 321 IPR000742 -
Rops8g01641 789 Gene3D Phosphorylase Kinase; domain 1 475 584 - -
Rops8g01641 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Rops8g01641 789 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 195 IPR036426 -
Rops8g01641 789 SUPERFAMILY Protein kinase-like (PK-like) 492 782 IPR011009 -
Rops8g01641 789 SMART blect_4 31 152 IPR001480 -
Rops8g01641 789 CDD EGF 287 320 - -
Rops8g01641 789 PANTHER OS07G0415500 PROTEIN 5 785 - -
Rops8g01641 789 ProSiteProfiles Bulb-type lectin domain profile. 19 150 IPR001480 -
Rops8g01641 789 PIRSF SRK 1 788 IPR024171 GO:0004674
Rops8g01641 789 ProSiteProfiles Protein kinase domain profile. 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01641 789 Pfam Protein kinase domain 514 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01641 789 Gene3D Transferase(Phosphotransferase) domain 1 585 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01641 Rops-Chr8 36699335 36701704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01641 501 782 Trihelix Transcription Factor Family AT5G38560 41.438 5.80e-62 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops8g01641 Pkinase 8.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01641 - - gmx:100783758 1230.7