Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01634 ATGCTCCTTAGACAAATGGGTGGGGAGCGCAAGGTGTACACTTTGGCCGAAGTATCTGAGCACAACAACTCCAAAGACTGTTGGCTTGTCATTGATGGCAAGGTTTATAATGTCACAAAATTCTTAGATGACCACCCCGGTGGGGATGATGTCTTGTTGTCTTCCACAGGAAAAGATGCAACTGATGACTTTGAGGATGTTGGTCATAGTACAACTGCTAGAGCCATGTTGGATGATTTATATGTTGGAGACATTGATTTGGCAACCATCCCTGCCAGAGTTAAAAACACTGCTCAAAGACAACCTCGTTATAATCAAGACAAAAGACCGGATTTCATTACCAAGATGCTCCAGTTTCTACTTCCCCTAATTTTCTTGGGTTTAGCAGTTGGTATTCGTTTCTACACCAAATCAACATAG 420 0.4238 MLLRQMGGERKVYTLAEVSEHNNSKDCWLVIDGKVYNVTKFLDDHPGGDDVLLSSTGKDATDDFEDVGHSTTARAMLDDLYVGDIDLATIPARVKNTAQRQPRYNQDKRPDFITKMLQFLLPLIFLGLAVGIRFYTKST* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01634 139 Gene3D - 4 89 IPR036400 -
Rops8g01634 139 PRINTS Cytochrome B5 signature 73 85 IPR001199 -
Rops8g01634 139 PRINTS Cytochrome B5 signature 45 59 IPR001199 -
Rops8g01634 139 PRINTS Cytochrome B5 signature 35 45 IPR001199 -
Rops8g01634 139 PRINTS Cytochrome B5 signature 60 67 IPR001199 -
Rops8g01634 139 PANTHER CYTOCHROME B5 8 136 - -
Rops8g01634 139 SMART Cyt_b5_2 13 86 IPR001199 -
Rops8g01634 139 FunFam Cytochrome b5 type B 7 89 - -
Rops8g01634 139 Pfam Cytochrome b5-like Heme/Steroid binding domain 14 85 IPR001199 -
Rops8g01634 139 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 8 90 IPR036400 -
Rops8g01634 139 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 41 48 IPR018506 GO:0020037
Rops8g01634 139 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 10 86 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01634 Rops-Chr8 36535102 36538074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01634 6 138 NADPH P450 reductases AT5G48810 66.667 1.18e-66 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01634 K23490 - jre:109006027 216.853