Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01621 ATGCTGTGTTGTTATTTGTTACACGTTGGTGTTGCAATAGGCACCATCACATCATCTCAATCCATCAAGGACCCTGAAACTCTAAGCTCCAAAGATGGTAACTTCACCTTGGGGTTCTTCAGCCCTCAAAATTCTACAAATCGCTACGTTGGAATTTGGTGGAAGTCTCAGTCCTCCATCATATGGGTGGCTAATAGAAATCAACCACTGGATGATTCTTCTGGAGTTGTCACAATATCTGAAGATGGAAATCTTGTGGTATTGAATGGACTGAAACGAGTCATTTGGTCATCAAATGTGTCCAACATAGCATCAAATACAAGTTCCCAGTTTTCAGACTATGGTAACCTTGTCCTTTTGGAAAGCTCAGAAGGAAACATCTTATGGCAGAGTTTTCAGCAACCTTCAGATACATTACTACCCGGTATGAAACTTTCAAGAAACACAATAACAGGTGAGGAAGTAAAGCTCACATCATGGAAAAGCCCTTCCAATCCATTCGTTGGGATCTTCTCTTCTAGTATCGTTGAACGCCTAAATATACCTGAAATGTTCATTTGGAATGAAACTCGACCGTATTGGCGTAGTGGTCCGTGGAATGGTGGGGTCTTTATAGGGATACCGACAATGGAATTTCCGTATGAAAATGGTTTTCATGGAGGAGATGATGGAGAAGGAAATATTGATATCTATTATACAATACCGAATGAGTCAGAATTCGTATTGTATAAGCTGAATTCGCAAGGCCAATATGAAGCGATTATGTGGGATGATGAGAAGAACAAAGTGTTAGTTGCATGGACTAACCCAGAATCGGAGTGTGATGTTTATGGTACATGTGGGGCATTTGCAAGCTGTGGTTTACGGAGCTCACCAATATGCAGCTGTTTGAGAGGGTTTGAACCCAGGAACAAACAAGAATGGAATAGACAAAACTGGACTAGAGGGTGTGTTAGGAGGACACCTTTGCAGTGTGAAAGGGTCAAAGATAAAAACACAAGTATAGATGCAAAGGCAGATGGTTTTTTGAAACTGCCAATGGTTAGAGTTCCAGATTTTGCAGAAGGGTCACCTGTTACACAAGAAATGTGTAGAAGCCAATGCTTGGATAATTGCTCTTGCATTGCTTATTCTCACGATGCTGGGATTGGCTGTATGTCTTGGACAGAGAATCTACTTGACATACGACAATTCTCGAGTGGAGGACGTGATCTGTATGTTCGTGTAGCCTATCCAGAACTTGATAAAGAGACAAACACAACAATCATCATTACAATTTCAGTCATAATAGGAACTGTCGTAATTGTCATTTGTGCATATATCATGTGGAGTAGGACTTCTAAGCACCCAGGTAAACTGTGGCACTCTATTAATCTAAGAAGGAAAAAGAACAACAAAGTTTTCCAACTAATTAATCAAGGTGAAACAAGAGACAATGTAATTGGAGAACTGGCACGAGTTAAATTCCAGGAGCTCCTACTTTTTGATTTTGAAAAGCTTGCAACTGCCACAAACAACTTCCAGTTGTCCAACAAACTTGGACAGGGTGGTTTTGGTCCTGTATACAAGGGGAAACTACAGGACAGTCGGGAAATAGCAGTTAAAAGACTTTCGAGAGCATCTGGACAAGGGCTAGAAGAATTCATGAATGAAGTAGTGGTGATTTGTAAGCTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGCTGTGTTGAAGGTGACGAAAAGATGTTGATCTATGAGTACATGCCGAACAAAAGTCTGGATGCATTTATCTTTGATCCATCAAAAAATAAACTCCTAGATTGGAGGATGCGCTCTAACATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCATAGAGATTCCAGATTAAAAATCATACATAGAGATTTGAAGGCAAGTAATATCTTGCTAGATGAAGAGCTAAATCCAAAAATATCGGACTTTGGTATGGCCAGAATTTTTGACGGGAGTGAAGATCAGGCAAATACTGAAAGAGTTGTTGGAACTTATGGCTATATGTCTCCCGAATATGCAATGCAAGGACTATTTTCTGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGATATTAGAGATTGTTAGTGGGAGAAGAAACTCAAGCTTTTACGACAACGAGCATGCTCTGAGCCTTTTAGGATTTGCCTGGCTGAAATGGAAGGAAGGCAATATTTTATCTTTAATAGATCCTGGAATATATGATCTTAGTCATCACAATTATATTTTAAGTGAGGCCGCATTTCTTCCTCCTCCAAGTCAACCCGCATTCATCCTAAGGCAGAACATGTTGAGTTCAGTGTCGTCTGAAGAATGTCATAGATTATGTTCTATCAATATTGTCAGCATTACAGACATTTGTGGAAGATAA 2394 0.3977 MLCCYLLHVGVAIGTITSSQSIKDPETLSSKDGNFTLGFFSPQNSTNRYVGIWWKSQSSIIWVANRNQPLDDSSGVVTISEDGNLVVLNGLKRVIWSSNVSNIASNTSSQFSDYGNLVLLESSEGNILWQSFQQPSDTLLPGMKLSRNTITGEEVKLTSWKSPSNPFVGIFSSSIVERLNIPEMFIWNETRPYWRSGPWNGGVFIGIPTMEFPYENGFHGGDDGEGNIDIYYTIPNESEFVLYKLNSQGQYEAIMWDDEKNKVLVAWTNPESECDVYGTCGAFASCGLRSSPICSCLRGFEPRNKQEWNRQNWTRGCVRRTPLQCERVKDKNTSIDAKADGFLKLPMVRVPDFAEGSPVTQEMCRSQCLDNCSCIAYSHDAGIGCMSWTENLLDIRQFSSGGRDLYVRVAYPELDKETNTTIIITISVIIGTVVIVICAYIMWSRTSKHPGKLWHSINLRRKKNNKVFQLINQGETRDNVIGELARVKFQELLLFDFEKLATATNNFQLSNKLGQGGFGPVYKGKLQDSREIAVKRLSRASGQGLEEFMNEVVVICKLQHRNLVRLLGCCVEGDEKMLIYEYMPNKSLDAFIFDPSKNKLLDWRMRSNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKISDFGMARIFDGSEDQANTERVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIVSGRRNSSFYDNEHALSLLGFAWLKWKEGNILSLIDPGIYDLSHHNYILSEAAFLPPPSQPAFILRQNMLSSVSSEECHRLCSINIVSITDICGR* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01621 797 FunFam receptor-like serine/threonine-protein kinase SD1-8 481 582 - -
Rops8g01621 797 SMART ntp_6 337 409 IPR003609 -
Rops8g01621 797 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 9 132 - -
Rops8g01621 797 SUPERFAMILY Protein kinase-like (PK-like) 491 741 IPR011009 -
Rops8g01621 797 CDD PAN_AP_plant 321 410 - -
Rops8g01621 797 Gene3D Transferase(Phosphotransferase) domain 1 583 783 - -
Rops8g01621 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Rops8g01621 797 SMART blect_4 19 135 IPR001480 -
Rops8g01621 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 50 166 IPR036426 -
Rops8g01621 797 SMART serkin_6 507 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01621 797 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 755 - -
Rops8g01621 797 Pfam D-mannose binding lectin 60 161 IPR001480 -
Rops8g01621 797 Pfam S-locus glycoprotein domain 194 303 IPR000858 GO:0048544
Rops8g01621 797 Pfam PAN-like domain 338 395 IPR003609 -
Rops8g01621 797 PIRSF SRK 1 755 IPR024171 GO:0004674
Rops8g01621 797 Pfam Protein tyrosine and serine/threonine kinase 508 715 IPR001245 GO:0004672|GO:0006468
Rops8g01621 797 ProSiteProfiles PAN/Apple domain profile. 325 410 IPR003609 -
Rops8g01621 797 ProSiteProfiles Bulb-type lectin domain profile. 13 132 IPR001480 -
Rops8g01621 797 Gene3D - 9 133 IPR036426 -
Rops8g01621 797 Gene3D Phosphorylase Kinase; domain 1 483 582 - -
Rops8g01621 797 CDD B_lectin 19 135 IPR001480 -
Rops8g01621 797 ProSiteProfiles Protein kinase domain profile. 507 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01621 797 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 4 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01621 Rops-Chr8 36193142 36196146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01621 460 741 Receptor kinase-like Gene Family AT4G11530 58.304 3.30e-106 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops8g01621 PK_Tyr_Ser-Thr 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01621 - - gmx:100779455 1222.99