Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01605 ATGAGGAAAAAGGAAAAGAAGGAGAAAAAGAAGAAACGAAGAGAAGGAATGGTTGTCGGTAAAGGTGGTTACAAGTGGTGCGGTGGCGCTAGACAAGCCGGTGACTATGAGGAGCTCTTGGATCAAACACCTCTTCTGCCAATTTCAAATTCAAGCTTGCGAGTAACTCCTGATGAATACGTTGTATTAAATGGACCATGCAAGCTGGAGATCTCTATTGATCCACCAATTTCTGTTCACAGAATAGATTTACCCATCACGCCCTTGGAACCTAACATTGACGGAGTACTAGAAATTTGGTTGGAACGATTGTATCTGGTGAACGCAAGATGGTCTTCCAAGGCTATAAAATCATTTGCATTGGCTGAATTGGAGGCAAGAAAACTCAAGTATCCAACCACCGGCACTGAAGCCCTTGTCATGGAGGTTCTCATGGAGGGCTATGCATATCTGTTCTATGTTTTATTCATGCTTTGTTGTTATTTGTTACACGTTGGTATTGCCATAAACACAATCACATCATCTCAATCCATCAAGGACCCTGAAACTCTAAGCTCCAAAGATGGTAACTTCTCCTTGGGGTTCTTCAGCCCTGAAAATTCTACAAATCGTTACGTTGGAATTTGGTGGAAGTCTCCATCCACAATCATATGGGTGGCTAACAGAAACAAACCACTGAATGATTCTTCTGGAGTTCTCACAATATCTGAGGATGGCAATCTTGTGGTATTGAATGGACAGAAACGAGTCATTTGGTCATCAAATGTGTCCAACATAACATCTAATACTAGTTCCCAGTTTTTTGACTTTGGTAACCTTGTCCTTTTGGAGAGCACAAAAGGAAACATCTTATGGCAGAGTATTCAGCAACCTTCAGATACATTACTGCCTGGTATGAAACTTTCAAGAAACACAAGAACAGGCGAGGATGTAAAACTCACATCATGGAAAAGCCCTTCTAATCCATCCATTGGGAGCTTCTCTTCTAGTGTTGTTGAACACCTAAATATTCCTGAAGTGTTCATTTGGAATGAAACACGACCATACTGGGGCAGTGGTCCGTGGAATGGTGGGGTCTTTACAGGGATACCGAACATGGGGTTTGGGTATCTTAATGGTTTTAGAGATGGAGATGATGAAGAAGGAAATATTGATATATATTATACAATAATAAATGCGTCAGAATTCAAATTGTACAAGCTGAATTCACAAGGCCAAACTGAAGCAAGACGTTGGGACGATGAGAAGAAGGAAGTGTTTGTGACATGGACTAGCAAAGAATCCGAGTGTGATGTTTATGATGGATTTTTGGAGCTGAAGATGGTTAAAGTTCCAGATTTTCCAGAACGGTCACGTGTTACACTAGACATGTGCAAAAGCCAATGCTTGGAGAATTGCTCTTGCATTGCATATTCTCACGATCCTGGGATTGGCTGTATGTCTTGGACTCGGAATCTGCTTGACATACGACAATTCTCAAGTGGAGGACTTGATCTATATTTTCGTGTTGCCTATACAGAACTTGGATTGCCAGATAAAGGTTCAAACACAACAATCATCATTACAATTACAGTGATAACAGGAACTGTCATAATTGTCATTTGCGTATATATCATGTGGAGCAGGACTTCCAAGCACCCAGCTAAACTGTGGCACTCTATCAAATCAACTTGCAAAAAGAACAACAAGGTTGTCCAACTATTCAGTAAAGTCATAACATCAGAAGATTCTACAAAAGACAGCGTAATTGGAGAACTGTCACTAGTTAAACTTCAGGAGCTATTACTATTTGATTTTGAAAAGCTTGCAACTGCCACAAATAACTTCGACTCGTCCAACAAACTTGGACAGGGTGGTTTTGGTCCCGTATACAAGGGGAAACTACAAGATGATGATCAGGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGGCTAGAAGAATTCATGAATGAAGTAATGGTGCTTTGTAAGCTTCAACACCGTAATCTTGTAAGACTTCTTGGCTGTTGCATTGAAGGTGACGAAAAGATGTTGATATATGAGTACATGCCAAATAAAAGTTTGGATGCTTTCCTCTTTGATCCATCGAAAAGTAAAATCCTAGATTGGAGAAAACGCTTTAGCATAATAGATGGAATAGCTCGAGGCTTGCTTTACCTTCACAGAGATTCTAGACTAAAAATCATACATAGAGATTTGAAGGCAAGTAACATCTTGCTAGATGAAGAGCTAAATCCAAAAATATCCGACTTTGGTATGGCAAGAATCTTCGTAGGGAGCGAAGATCAGGCAATTACCAGAACAATTGGTGGAACTTATGGCTATATGTCTCCTGAATATGCAATGGAAGGATTGTTTTCTGAGAAATCAGATGTTTTTAGCTTTGGTGTTTTGACACTAGAGATTGTTATCGGGAGAAGAAACTCAAGCTTTTACTACAATGAGCATGCTCTGAGCCTTTTAGGATTTGTCTGGCAAAAATGGAGTGAAGACAATATTTTATCTTTAATTGATGCAGGAGTATTGGATCTTCATCATAAGCATATTTTAACGTGTATACACATAGGACTCTTGTGCGTACAAGAGCTAGTTGTAAACAGACCCACTATGGCTGCAGTAATTTCTATGTTGAACAGTGAGGTTGCGTTTCTTCCTCCTCCAAGTCAACCTGCATTTATCCTGAGGCAGAATATGTTGAATTCAGTGTTGGCTAAGGAAAGTCATAGGTTATGTTCCATCAATGTTGTTAGTGTTACAAACATTAGTGGAAGATAG 2784 0.3976 MRKKEKKEKKKKRREGMVVGKGGYKWCGGARQAGDYEELLDQTPLLPISNSSLRVTPDEYVVLNGPCKLEISIDPPISVHRIDLPITPLEPNIDGVLEIWLERLYLVNARWSSKAIKSFALAELEARKLKYPTTGTEALVMEVLMEGYAYLFYVLFMLCCYLLHVGIAINTITSSQSIKDPETLSSKDGNFSLGFFSPENSTNRYVGIWWKSPSTIIWVANRNKPLNDSSGVLTISEDGNLVVLNGQKRVIWSSNVSNITSNTSSQFFDFGNLVLLESTKGNILWQSIQQPSDTLLPGMKLSRNTRTGEDVKLTSWKSPSNPSIGSFSSSVVEHLNIPEVFIWNETRPYWGSGPWNGGVFTGIPNMGFGYLNGFRDGDDEEGNIDIYYTIINASEFKLYKLNSQGQTEARRWDDEKKEVFVTWTSKESECDVYDGFLELKMVKVPDFPERSRVTLDMCKSQCLENCSCIAYSHDPGIGCMSWTRNLLDIRQFSSGGLDLYFRVAYTELGLPDKGSNTTIIITITVITGTVIIVICVYIMWSRTSKHPAKLWHSIKSTCKKNNKVVQLFSKVITSEDSTKDSVIGELSLVKLQELLLFDFEKLATATNNFDSSNKLGQGGFGPVYKGKLQDDDQEIAVKRLSRASGQGLEEFMNEVMVLCKLQHRNLVRLLGCCIEGDEKMLIYEYMPNKSLDAFLFDPSKSKILDWRKRFSIIDGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKISDFGMARIFVGSEDQAITRTIGGTYGYMSPEYAMEGLFSEKSDVFSFGVLTLEIVIGRRNSSFYYNEHALSLLGFVWQKWSEDNILSLIDAGVLDLHHKHILTCIHIGLLCVQELVVNRPTMAAVISMLNSEVAFLPPPSQPAFILRQNMLNSVLAKESHRLCSINVVSVTNISGR* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01605 927 CDD B_lectin 175 287 IPR001480 -
Rops8g01605 927 Pfam D-mannose binding lectin 215 317 IPR001480 -
Rops8g01605 927 ProSiteProfiles Bulb-type lectin domain profile. 169 288 IPR001480 -
Rops8g01605 927 SMART ntp_6 431 503 IPR003609 -
Rops8g01605 927 CDD STKc_IRAK 615 881 - -
Rops8g01605 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Rops8g01605 927 Gene3D Phosphorylase Kinase; domain 1 570 685 - -
Rops8g01605 927 SMART blect_4 175 291 IPR001480 -
Rops8g01605 927 Pfam S-locus glycoprotein domain 350 434 IPR000858 GO:0048544
Rops8g01605 927 PIRSF SRK 141 435 IPR024171 GO:0004674
Rops8g01605 927 PIRSF SRK 433 927 IPR024171 GO:0004674
Rops8g01605 927 Gene3D Transferase(Phosphotransferase) domain 1 686 885 - -
Rops8g01605 927 Pfam PAN-like domain 430 489 IPR003609 -
Rops8g01605 927 Pfam Protein tyrosine and serine/threonine kinase 612 879 IPR001245 GO:0004672|GO:0006468
Rops8g01605 927 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 165 288 - -
Rops8g01605 927 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 434 871 - -
Rops8g01605 927 SUPERFAMILY Protein kinase-like (PK-like) 596 907 IPR011009 -
Rops8g01605 927 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 685 - -
Rops8g01605 927 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 686 888 - -
Rops8g01605 927 CDD PAN_AP_plant 434 504 - -
Rops8g01605 927 ProSiteProfiles Protein kinase domain profile. 609 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01605 927 Gene3D - 164 289 IPR036426 -
Rops8g01605 927 SUPERFAMILY alpha-D-mannose-specific plant lectins 207 322 IPR036426 -
Rops8g01605 927 SMART serkin_6 609 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01605 927 ProSiteProfiles PAN/Apple domain profile. 430 504 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01605 Rops-Chr8 35999741 36012801 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01605 503 927 Receptor kinase-like Gene Family AT4G21410 48.961 8.87e-117 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops8g01605 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01605 - - gmx:113002415 995.342