Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01602 ATGGTCAAAGTTCCAGATTTTGCAGATGGGTCATCTCTCACACTCACACAAGACACATGTAAAAGCAAGTGTTTGGAAAATTGCTATTGCGTTGCATATTCCCATGATGCTGATATTGGTTGTATGTTTTGGACTGTGAATATAATCGACATACAACAGTTTTCAAAAGGAGGACTTGATCTATATATTCGTGTAGCCTACACGGAACTTGATAAGAAGAAAAACATGGCAGTCATCATTATTACAACAGTGACGACAACTGGAACTGCCTTAATCCTCACTTGCGCATATATCATGTGTAGAAGGACTTCTAACCACAAAGCAAGGAGAAAGAAGAGCAAAGGATTCCTGCAATTTAACAGAGGTGAAACATCTGAAGAGCATACAAGTGACAACGTAATTGGAGAACTATCACAAGTTAAACTCCAGGAGCTATTGCAATTTAATTTTGGAAAGCTTGCAACTGCCACCAACAACTTTCACTCATCCAACAAACTTGGGCAGGGTGGTTTTGGTCTGGTATACAAGGGCAAACTGCATGATGGTCAGGAAATAGCGGTTAAAAGGCTTTCTAAAGCATCTGGACAAGGTCTAGAAGAATTCATGAATGAAATAGTGGTGATTTCTAAGCTCCAACACCGTAATCTTGTAAGACTTCTTGGCTGTTGTGTTAAAGGAGAGGAAAAGATTTTGATTTATGAGTACATGCCAAATAAAAGTTTGGACGCATTTCTCTTTGATCCATCGAAAAATAAAATCCTGGATTGGAGAAAACGCTTTAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCACAGAGATTCCAGACTCAAAATCATCCATAGAGATTTGAAGGCAAGTAATATCTTGCTGGGTGAGGATCTAAATCCAAAAATATCGGACTTTGGTATGGCCAGAATCTTTGGAGGGAGTGAAGATGAGGCAAATACTAGAAGAGTTGTTGGAACTTATGGCTATATGTCTCCTGAATATGCAATGCAAGGACTATTTTCTGAAAAATCAGACATCTTTAGCTTTGGGGTTTTGTTACTTGAGATTGTTAGTGGAAGACGAAATTCAAGCTTTTATGACAACGAGAATTCTCTGACCCTTTTAGGATATGCCTGGACACAATGGACAGAGGACAACATTTTGTCTCTCATAGATCCAGGAATATATGATCCAAGCCTTCATAAGTATATATTTAGGTCCATACACATAGGCCTTTTGTGTGTACAAGAATTTGCTGTAGACAGGCCTACTATAGGTACTATAATTTCTATGCTTAATAGTGAGATTGAGAATCTTCCTCCTCCAAAGAAACCCGCATTCATCCTAGTGCAGAATATGTTGAGTTCAGTGACTCCTGAAGAAAGTAATAGACTTCGCTCCATCAATACAGTCAGTATTACAGAGATCTGTGGAAGATAA 1437 0.3848 MVKVPDFADGSSLTLTQDTCKSKCLENCYCVAYSHDADIGCMFWTVNIIDIQQFSKGGLDLYIRVAYTELDKKKNMAVIIITTVTTTGTALILTCAYIMCRRTSNHKARRKKSKGFLQFNRGETSEEHTSDNVIGELSQVKLQELLQFNFGKLATATNNFHSSNKLGQGGFGLVYKGKLHDGQEIAVKRLSKASGQGLEEFMNEIVVISKLQHRNLVRLLGCCVKGEEKILIYEYMPNKSLDAFLFDPSKNKILDWRKRFSIIEGIARGLLYLHRDSRLKIIHRDLKASNILLGEDLNPKISDFGMARIFGGSEDEANTRRVVGTYGYMSPEYAMQGLFSEKSDIFSFGVLLLEIVSGRRNSSFYDNENSLTLLGYAWTQWTEDNILSLIDPGIYDPSLHKYIFRSIHIGLLCVQEFAVDRPTIGTIISMLNSEIENLPPPKKPAFILVQNMLSSVTPEESNRLRSINTVSITEICGR* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01602 478 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 236 439 - -
Rops8g01602 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Rops8g01602 478 SMART serkin_6 160 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01602 478 SUPERFAMILY Protein kinase-like (PK-like) 145 462 IPR011009 -
Rops8g01602 478 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 124 235 - -
Rops8g01602 478 SMART ntp_6 1 65 IPR003609 -
Rops8g01602 478 ProSiteProfiles Protein kinase domain profile. 160 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01602 478 ProSitePatterns Protein kinases ATP-binding region signature. 166 188 IPR017441 GO:0005524
Rops8g01602 478 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 457 - -
Rops8g01602 478 Pfam Protein tyrosine and serine/threonine kinase 162 390 IPR001245 GO:0004672|GO:0006468
Rops8g01602 478 Gene3D Transferase(Phosphotransferase) domain 1 236 439 - -
Rops8g01602 478 CDD STKc_IRAK 166 432 - -
Rops8g01602 478 Pfam PAN-like domain 2 51 IPR003609 -
Rops8g01602 478 ProSiteProfiles PAN/Apple domain profile. 1 66 IPR003609 -
Rops8g01602 478 CDD PAN_AP_plant 1 66 - -
Rops8g01602 478 Gene3D Phosphorylase Kinase; domain 1 121 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01602 Rops-Chr8 35918615 35922199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01602 109 478 Receptor kinase-like Gene Family AT4G11530 54.787 4.35e-131 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops8g01602 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01602 - - tpra:123892366 709.138