Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01596 ATGAGGTCTGTTCAGAAAGTTCACAAACCAAGAAATTCAAGTGATGATGAGAAAAGGAAGTTGTTGCAGAATTTGAGGGCCAAGGTTGATAACATTAGTAGATTGTGTAAGGTTTCTGAAAATGAAGAAGATTCAGAGCCTGAGGATGGCATTCATACTAATGTCATCTCCGGAGAGGGATGCCAGCGACGGTGGTCGCCTCCACTACACGACACCATTACTTCATCCAAGTTCATCAAGGACCCTGAAACTCTACGCTCCAATGGTGGTAACTTCACCTTGGGCTTCTTCAGCCCAGAAAATTCTACAAATCGCTACGTGGGAATTTGGTGGCAGCCCCAATTCACAGTCATATGGGTGGCTAACAGAAACCAACCTCTCAGGGATTCTTCTGGGATTGTTACAGTATCTGAGGATGGCAATCTTGTGGTATTGAATGGACAGAAACAGGTCATTTGGTCATCTAATGTGTCCAATATTGCAACCAATTCTAGTTGCAAACTTTTAGATTCTGGGAACCTTGTACTGCTCGAAAGATCAACAGGAAGCAACATATGGGAGAGTTTCCAGCATCCTTCCAATGTAATATTGCCCGATATGAAACTTACAAGCAACAAAAGAATAGGTGAGAAAGTAAAGCTAACATCCTGGAAAAGCCCTTCTAATCCATCAATTGGGAACTTCTCTTTAAGCGTTGAACGCCTTAGCATACCTGAATTGTTCATTTGGAAAGAAACTCGCCCATACTGGCGCACTGGTCCATGGAATGGAAAGGTCTTTACAGGGCAGCCCTGGATGAAAAACTATTATCTTAATGGTGTACATGTGGGAGAAGATGGAGAAGGAAATGTTTACTTCTTTCTCACAACAGTGGATGAGGTTGGTTTGATAATCTATGTTCTGAATTCAGATGGCAATTGTGAAGAGAAATGGTGGGATGAAAAAAAGAAAGAGTGGCGAGTATTATGGAATAGTCATCAATCAGAATGTGACGTTTATGGTGTATGCGGACCTTTTGCAAGCTGTAATTCACAGGGTTCACCAATATGCAGCTGTTTGAAAAGGTTTGAGCCAAGGAACAATCAGGAATGGGATAGACAAAACTGGACTAGTGGATGTATTAGGAGGACACCTCTGCAGTGTGAAAGGGCCAGCAATCAAAACACAAGTGCTGACAATAAAGCAGATGGGTTTTTGAAGCTACAGATGATCAAAGTTCCAGATTTTGCAGATGGGTCATCTCTCACACTCACACCAGACACATGTAGAAGCAAGTGTTTGGAGAATTGCTCTTGCGTTGCATATTCCTATGATGCTGAGATTGGTTGTATGTCTTGGACTGGGAATCTAATCGACACAGAACAATTCTCAAATGGAGGACTTGATCTTTATATTCGTGTAGCTTACACAGAACTTGATAAAGAGAGAAACATGACAGTCATCATTATTATAACAGTGACAATAGGAACTGCCTTAATTCTCGCTTGCGCATATATCACGTGGAGAAGGATTTCTAGCCACCACGCAAGAAGAAAGAAGAGCAAAGGATTCCTACAATTTAACAGAGGCGAAACAACTGAAGAGTATGCAAGAGACAACATAATTGGAGAACTGTCACAAGTTAAACTCCAGGAGCTATTACAGTTTAATATTGGAAAGCTTGCAAAGGCCACAGACAATTTTCACTTATCCAACAAAATTGGGCAGGGTGGTTTTGGTCCGGTATACAAGGGGAAACTGCATGATGGTCGGGAAATAGCGGTAAAAAGACTTTCAAAAGCATCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTAGTGGTCATTTCTAAGCTTCAACATCGCAATCTTGTAAAACTTCTTGGCTGCTGCATTGAAGGAGAGGAAAAGATGTTAATATATGAGTATATGCCAAATAAAAGCTTGGATGCATTTCTATTTGATCCATCAAAAAATAAAATCCTAGATTGGAGAAAACGCTTTAGCATAATAGATGGAATAGCTCGAGGATTGCTTTATCTTCACAGAGATTCCAGATTAAAAATCATACATAGAGACTTGAAGGCAAGTAATATCTTGCTAGATGAGGATCTAAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTTGGAGGGAGTGAAGATGAGGCAAATACTAGAAGAGTTGTTGGAACTTACGGCTATATGTCTCCTGAATATGCAATGCAAGGAATGTTTTCTGAGAAATCGGACATCTTTAGCTTTGGGGTTTTGCTACTTGAGACTGTTAGTGGAAGACGAAATTCAAGCTTTTATGACAACGAGAATTCTCTAACCCTTTTAGGATATGCCTGGACACGATGGACAGAGGACAACATTTTATCTCTCATAGTTCCAGGAATATATGATCCAAGCCTTCATAAGTATATTTTTAGGTCCATACACATAGGCCTTCTGTGTGTACAAGAATTTGCTATAGACAGGCCCACTATGGCTACTGTAATTTCTATGCTTAATAGTGAGATTGATAATCTTCCTCCTCCAAAGAAACCCGCATTCATCTTAGTGCAGAATATGTTGAATTCAGTGACGTCTGAAGAAAGTGATAGGCTTCGTTCCATCAATACAGTCAGTATTACAGAGATCTGTGGAAGATAG 2640 0.4027 MRSVQKVHKPRNSSDDEKRKLLQNLRAKVDNISRLCKVSENEEDSEPEDGIHTNVISGEGCQRRWSPPLHDTITSSKFIKDPETLRSNGGNFTLGFFSPENSTNRYVGIWWQPQFTVIWVANRNQPLRDSSGIVTVSEDGNLVVLNGQKQVIWSSNVSNIATNSSCKLLDSGNLVLLERSTGSNIWESFQHPSNVILPDMKLTSNKRIGEKVKLTSWKSPSNPSIGNFSLSVERLSIPELFIWKETRPYWRTGPWNGKVFTGQPWMKNYYLNGVHVGEDGEGNVYFFLTTVDEVGLIIYVLNSDGNCEEKWWDEKKKEWRVLWNSHQSECDVYGVCGPFASCNSQGSPICSCLKRFEPRNNQEWDRQNWTSGCIRRTPLQCERASNQNTSADNKADGFLKLQMIKVPDFADGSSLTLTPDTCRSKCLENCSCVAYSYDAEIGCMSWTGNLIDTEQFSNGGLDLYIRVAYTELDKERNMTVIIIITVTIGTALILACAYITWRRISSHHARRKKSKGFLQFNRGETTEEYARDNIIGELSQVKLQELLQFNIGKLAKATDNFHLSNKIGQGGFGPVYKGKLHDGREIAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVKLLGCCIEGEEKMLIYEYMPNKSLDAFLFDPSKNKILDWRKRFSIIDGIARGLLYLHRDSRLKIIHRDLKASNILLDEDLNPKISDFGMARIFGGSEDEANTRRVVGTYGYMSPEYAMQGMFSEKSDIFSFGVLLLETVSGRRNSSFYDNENSLTLLGYAWTRWTEDNILSLIVPGIYDPSLHKYIFRSIHIGLLCVQEFAIDRPTMATVISMLNSEIDNLPPPKKPAFILVQNMLNSVTSEESDRLRSINTVSITEICGR* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01596 879 Pfam Protein tyrosine and serine/threonine kinase 562 773 IPR001245 GO:0004672|GO:0006468
Rops8g01596 879 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 70 823 - -
Rops8g01596 879 SMART blect_4 76 192 IPR001480 -
Rops8g01596 879 Gene3D Phosphorylase Kinase; domain 1 522 636 - -
Rops8g01596 879 Pfam S-locus glycoprotein domain 250 359 IPR000858 GO:0048544
Rops8g01596 879 Pfam PAN-like domain 393 453 IPR003609 -
Rops8g01596 879 Pfam D-mannose binding lectin 116 218 IPR001480 -
Rops8g01596 879 SMART serkin_6 561 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01596 879 ProSiteProfiles Bulb-type lectin domain profile. 70 189 IPR001480 -
Rops8g01596 879 Coils Coil 22 42 - -
Rops8g01596 879 ProSiteProfiles PAN/Apple domain profile. 381 468 IPR003609 -
Rops8g01596 879 CDD STKc_IRAK 567 833 - -
Rops8g01596 879 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 523 636 - -
Rops8g01596 879 CDD B_lectin 76 192 IPR001480 -
Rops8g01596 879 SMART ntp_6 393 467 IPR003609 -
Rops8g01596 879 SUPERFAMILY Protein kinase-like (PK-like) 550 863 IPR011009 -
Rops8g01596 879 SUPERFAMILY alpha-D-mannose-specific plant lectins 107 257 IPR036426 -
Rops8g01596 879 PIRSF SRK 64 879 IPR024171 GO:0004674
Rops8g01596 879 Gene3D Transferase(Phosphotransferase) domain 1 637 839 - -
Rops8g01596 879 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 637 840 - -
Rops8g01596 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 682 694 IPR008271 GO:0004672|GO:0006468
Rops8g01596 879 ProSiteProfiles Protein kinase domain profile. 561 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01596 879 CDD PAN_AP_plant 377 468 - -
Rops8g01596 879 Gene3D - 65 190 IPR036426 -
Rops8g01596 879 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 68 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01596 Rops-Chr8 35847589 35852375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01596 510 879 Receptor kinase-like Gene Family AT4G11530 55.053 2.25e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops8g01596 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01596 - - tpra:123892366 1155.2