Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g01594 | ATGCTGTGTTCTTATTTGGTACACGTTAGTGTTGCCATAGATGCCATCACGTCATCTCAATCAATCAAGGACCCTGAAACTCTAAGCTCCAAAGATGGTAACTTCACATTGGGGTTCTTTAGCCCTCAAAATTCTAGAAATCGTTACGTTGGTATTTGGTGGAAGTCTCAATCCACAATAATATGGGTGGCTAACAGAAACCAACCACTGCATGATTCTTCTGGGGTTGTCACAATATATGAAGATGGCAATCTCGTGGTATTGGATGGACAAAAACGAGTCATTTGGTCTTCAAATGTGTCCAACATAGCATCAAATACTAGTTCTCAGTTTTCAGACTTTGGTAACCTTGTCCTTTCGGATAACACAAAAGGGAACGTCTTATGGCAGAGTATTCAGCAACCTACAGATACATTACTACCCGGTATGAAACTTTCAAGAAAAACAAGAACAGTGTTTATTTGGAATGAAACTCGACCCTACTGGCGCAGTGGTCCGTGGAATGGTAGGATCTTTACAGGAATACCAACAATGGGATCTGGGTATATGAATGGTTTTCAAGTTGGAGATGACGGAGAAGGAAATATTGAAATGTATTATGCTATACCAGATGAGTCACAATTCTTATTATATAAAGTGAATTCGCAAGGCCAATATGAAGATTCATCATGGGACGACGAGAAGAAACAAGTGGTACTAATATGGAGTAGCAACAAAACAGAGTGTAATGTTTATGGTATATGTGGGGCATTCGCAAGCTGTAGTTCACAGAATTCACCAATATGCAGCTGTTTGAGAGGGTTTGAACCCAGGAACAAACAGGAATGGAGTAGTCAAAACTGGAGTAGAGGGTGTGTTAGGAGGACACCATTACAGTGTGAAAGGGTCAAAGATAAAAACACAAGTTTAGATACAAAGGCCGATGGTTTTTGGAAACTACAGATGGTTAAAGTTCCAGATTTTGCAGAAGGGTCACGTGTTACACCAGACATGTGTAGAAGCCAATGTTTGGAGAATTGCTCTTGCATTGCGTATTCTCACAATGATGGGATTGGTTGTATGTCTTGGACTGGGGATCTACTTGACATACAACAATTCTCTACTGGTGGACTTGATCTATATGTTCGTGTACCTTATACAGAACTTGCAGATAAAGGGAAAAACGCAACGACCATCATTACAATTACAGTGACGATAGGAACTGTCATAATTGTCATTTGTGGATATATCATGTGGAGAAGGAATTCTAAGCATCCAGGAACCAACTACGCTTACATTATGTTGCTCACTCCAGCTAAATTGTGGCGCTCTGTTAAATCAACAAGGAAGAAGAAGAAAAAAGCTTTGAAACTACTTAATAAAGGTGATACATCTACAAGTGATAGCGTAATTCAACTGTCACAAGTTAAACTCCAGGAGGAGCTATCATTCTTTGATTTTGAAGATCTTGCAACTGCCACAAACAACTTTCACCGGTCCAACAAACTTGGACAGGGTGGTTTTGGTCCTGTATACAAGGGGAAACTACAAGATGGTCAGGAAATAGCAGTTAAAAGGCTTTCTAGAGCATCTGGACAAGGGCTAGAAGAATTCATGAATGAAGTAGTGCTGATTTGTAAACTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGCTGTATTGAAGGCGACGAAAAGATGTTGATATATGAGTACATGTCGAACAAAAGTTTGGATGCATTTATCTTTGATCCATCAGAAAATAAACTCCAAGATTGGAGGGTGCGCTGTAGCATAATAGAAGGTATAGCTCGAGGATTGCTTTATCTTCACAGAGATTCCAGACTAAGAATCATACACAGAGATTTGAAAGCAAGTAATATCTTGTTAGATGAGGAGCTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGGAGTGAAAACCAGGCCAATACGAACAGAGTTGTCGGAACTTATGGCTACATGTCTCCTGAATATGCAATGCAAGGTCTTTTCTCTGAGAAATCAGATGTATTTAGCTTTGGTGTTTTGATACTAGAGATTGTTAGTGGGAGACGAAACTCAAGCTTTTATGACAATGAGCAAGCTCTTAGCCTTTTAGGATTTGCCTGGCTAAAATGGAAGGAAGGTGATATTTTAGCTTTAATAGATCCAAGGATATATGATCTTAGTCAGCATAATTATATTTTAAGGAGCATACATATAGGACTTCTGTGTGTCCAAGAACAAGCTGTAGATAGGCCCTCTATGGCTGTCGTAATTTCTATGCTTAACAGTGAGGTTGCATTTCTTCCTCCTCCAAGTCAACCTGCTTTCATCCTAAGGCAGAATATGTTGAGTTCAATGTCGTTTGAAGAAGTTTGTAGACTCTCTTCGATCAATAATGTCAGTATTACAGACATATGTGGTAGATAG | 2427 | 0.3939 | MLCSYLVHVSVAIDAITSSQSIKDPETLSSKDGNFTLGFFSPQNSRNRYVGIWWKSQSTIIWVANRNQPLHDSSGVVTIYEDGNLVVLDGQKRVIWSSNVSNIASNTSSQFSDFGNLVLSDNTKGNVLWQSIQQPTDTLLPGMKLSRKTRTVFIWNETRPYWRSGPWNGRIFTGIPTMGSGYMNGFQVGDDGEGNIEMYYAIPDESQFLLYKVNSQGQYEDSSWDDEKKQVVLIWSSNKTECNVYGICGAFASCSSQNSPICSCLRGFEPRNKQEWSSQNWSRGCVRRTPLQCERVKDKNTSLDTKADGFWKLQMVKVPDFAEGSRVTPDMCRSQCLENCSCIAYSHNDGIGCMSWTGDLLDIQQFSTGGLDLYVRVPYTELADKGKNATTIITITVTIGTVIIVICGYIMWRRNSKHPGTNYAYIMLLTPAKLWRSVKSTRKKKKKALKLLNKGDTSTSDSVIQLSQVKLQEELSFFDFEDLATATNNFHRSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGLEEFMNEVVLICKLQHRNLVRLLGCCIEGDEKMLIYEYMSNKSLDAFIFDPSENKLQDWRVRCSIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMARIFGGSENQANTNRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIVSGRRNSSFYDNEQALSLLGFAWLKWKEGDILALIDPRIYDLSQHNYILRSIHIGLLCVQEQAVDRPSMAVVISMLNSEVAFLPPPSQPAFILRQNMLSSMSFEEVCRLSSINNVSITDICGR* | 809 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g01594 | 808 | PIRSF | SRK | 146 | 808 | IPR024171 | GO:0004674 | |
Rops8g01594 | 808 | PIRSF | SRK | 1 | 152 | IPR024171 | GO:0004674 | |
Rops8g01594 | 808 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 5 | 753 | - | - | |
Rops8g01594 | 808 | Gene3D | Transferase(Phosphotransferase) domain 1 | 566 | 766 | - | - | |
Rops8g01594 | 808 | Gene3D | - | 7 | 133 | IPR036426 | - | |
Rops8g01594 | 808 | Pfam | S-locus glycoprotein domain | 162 | 271 | IPR000858 | GO:0048544 | |
Rops8g01594 | 808 | ProSiteProfiles | PAN/Apple domain profile. | 293 | 378 | IPR003609 | - | |
Rops8g01594 | 808 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 50 | 169 | IPR036426 | - | |
Rops8g01594 | 808 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 9 | 132 | - | - | |
Rops8g01594 | 808 | Pfam | PAN-like domain | 305 | 363 | IPR003609 | - | |
Rops8g01594 | 808 | Gene3D | Phosphorylase Kinase; domain 1 | 452 | 565 | - | - | |
Rops8g01594 | 808 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 611 | 623 | IPR008271 | GO:0004672|GO:0006468 | |
Rops8g01594 | 808 | CDD | B_lectin | 19 | 131 | IPR001480 | - | |
Rops8g01594 | 808 | Pfam | Protein tyrosine and serine/threonine kinase | 492 | 759 | IPR001245 | GO:0004672|GO:0006468 | |
Rops8g01594 | 808 | ProSiteProfiles | Protein kinase domain profile. | 490 | 768 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g01594 | 808 | FunFam | Putative G-type lectin S-receptor-like serine/threonine-protein kinase | 453 | 565 | - | - | |
Rops8g01594 | 808 | CDD | PAN_AP_plant | 289 | 378 | - | - | |
Rops8g01594 | 808 | SUPERFAMILY | Protein kinase-like (PK-like) | 475 | 795 | IPR011009 | - | |
Rops8g01594 | 808 | SMART | serkin_6 | 490 | 733 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g01594 | 808 | ProSiteProfiles | Bulb-type lectin domain profile. | 13 | 132 | IPR001480 | - | |
Rops8g01594 | 808 | Pfam | D-mannose binding lectin | 59 | 151 | IPR001480 | - | |
Rops8g01594 | 808 | SMART | blect_4 | 19 | 135 | IPR001480 | - | |
Rops8g01594 | 808 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 566 | 769 | - | - | |
Rops8g01594 | 808 | CDD | STKc_IRAK | 496 | 762 | - | - | |
Rops8g01594 | 808 | SMART | ntp_6 | 305 | 377 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g01594 | Rops-Chr8 | 35818293 | 35821348 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops8g01594 | 385 | 787 | Receptor kinase-like Gene Family | AT4G23190 | 48.039 | 3.07e-123 | 381 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Rops8g01594 | PK_Tyr_Ser-Thr | 4.6e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g01594 | - | - | gmx:100779455 | 1159.82 |