Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01594 ATGCTGTGTTCTTATTTGGTACACGTTAGTGTTGCCATAGATGCCATCACGTCATCTCAATCAATCAAGGACCCTGAAACTCTAAGCTCCAAAGATGGTAACTTCACATTGGGGTTCTTTAGCCCTCAAAATTCTAGAAATCGTTACGTTGGTATTTGGTGGAAGTCTCAATCCACAATAATATGGGTGGCTAACAGAAACCAACCACTGCATGATTCTTCTGGGGTTGTCACAATATATGAAGATGGCAATCTCGTGGTATTGGATGGACAAAAACGAGTCATTTGGTCTTCAAATGTGTCCAACATAGCATCAAATACTAGTTCTCAGTTTTCAGACTTTGGTAACCTTGTCCTTTCGGATAACACAAAAGGGAACGTCTTATGGCAGAGTATTCAGCAACCTACAGATACATTACTACCCGGTATGAAACTTTCAAGAAAAACAAGAACAGTGTTTATTTGGAATGAAACTCGACCCTACTGGCGCAGTGGTCCGTGGAATGGTAGGATCTTTACAGGAATACCAACAATGGGATCTGGGTATATGAATGGTTTTCAAGTTGGAGATGACGGAGAAGGAAATATTGAAATGTATTATGCTATACCAGATGAGTCACAATTCTTATTATATAAAGTGAATTCGCAAGGCCAATATGAAGATTCATCATGGGACGACGAGAAGAAACAAGTGGTACTAATATGGAGTAGCAACAAAACAGAGTGTAATGTTTATGGTATATGTGGGGCATTCGCAAGCTGTAGTTCACAGAATTCACCAATATGCAGCTGTTTGAGAGGGTTTGAACCCAGGAACAAACAGGAATGGAGTAGTCAAAACTGGAGTAGAGGGTGTGTTAGGAGGACACCATTACAGTGTGAAAGGGTCAAAGATAAAAACACAAGTTTAGATACAAAGGCCGATGGTTTTTGGAAACTACAGATGGTTAAAGTTCCAGATTTTGCAGAAGGGTCACGTGTTACACCAGACATGTGTAGAAGCCAATGTTTGGAGAATTGCTCTTGCATTGCGTATTCTCACAATGATGGGATTGGTTGTATGTCTTGGACTGGGGATCTACTTGACATACAACAATTCTCTACTGGTGGACTTGATCTATATGTTCGTGTACCTTATACAGAACTTGCAGATAAAGGGAAAAACGCAACGACCATCATTACAATTACAGTGACGATAGGAACTGTCATAATTGTCATTTGTGGATATATCATGTGGAGAAGGAATTCTAAGCATCCAGGAACCAACTACGCTTACATTATGTTGCTCACTCCAGCTAAATTGTGGCGCTCTGTTAAATCAACAAGGAAGAAGAAGAAAAAAGCTTTGAAACTACTTAATAAAGGTGATACATCTACAAGTGATAGCGTAATTCAACTGTCACAAGTTAAACTCCAGGAGGAGCTATCATTCTTTGATTTTGAAGATCTTGCAACTGCCACAAACAACTTTCACCGGTCCAACAAACTTGGACAGGGTGGTTTTGGTCCTGTATACAAGGGGAAACTACAAGATGGTCAGGAAATAGCAGTTAAAAGGCTTTCTAGAGCATCTGGACAAGGGCTAGAAGAATTCATGAATGAAGTAGTGCTGATTTGTAAACTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGCTGTATTGAAGGCGACGAAAAGATGTTGATATATGAGTACATGTCGAACAAAAGTTTGGATGCATTTATCTTTGATCCATCAGAAAATAAACTCCAAGATTGGAGGGTGCGCTGTAGCATAATAGAAGGTATAGCTCGAGGATTGCTTTATCTTCACAGAGATTCCAGACTAAGAATCATACACAGAGATTTGAAAGCAAGTAATATCTTGTTAGATGAGGAGCTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGGAGTGAAAACCAGGCCAATACGAACAGAGTTGTCGGAACTTATGGCTACATGTCTCCTGAATATGCAATGCAAGGTCTTTTCTCTGAGAAATCAGATGTATTTAGCTTTGGTGTTTTGATACTAGAGATTGTTAGTGGGAGACGAAACTCAAGCTTTTATGACAATGAGCAAGCTCTTAGCCTTTTAGGATTTGCCTGGCTAAAATGGAAGGAAGGTGATATTTTAGCTTTAATAGATCCAAGGATATATGATCTTAGTCAGCATAATTATATTTTAAGGAGCATACATATAGGACTTCTGTGTGTCCAAGAACAAGCTGTAGATAGGCCCTCTATGGCTGTCGTAATTTCTATGCTTAACAGTGAGGTTGCATTTCTTCCTCCTCCAAGTCAACCTGCTTTCATCCTAAGGCAGAATATGTTGAGTTCAATGTCGTTTGAAGAAGTTTGTAGACTCTCTTCGATCAATAATGTCAGTATTACAGACATATGTGGTAGATAG 2427 0.3939 MLCSYLVHVSVAIDAITSSQSIKDPETLSSKDGNFTLGFFSPQNSRNRYVGIWWKSQSTIIWVANRNQPLHDSSGVVTIYEDGNLVVLDGQKRVIWSSNVSNIASNTSSQFSDFGNLVLSDNTKGNVLWQSIQQPTDTLLPGMKLSRKTRTVFIWNETRPYWRSGPWNGRIFTGIPTMGSGYMNGFQVGDDGEGNIEMYYAIPDESQFLLYKVNSQGQYEDSSWDDEKKQVVLIWSSNKTECNVYGICGAFASCSSQNSPICSCLRGFEPRNKQEWSSQNWSRGCVRRTPLQCERVKDKNTSLDTKADGFWKLQMVKVPDFAEGSRVTPDMCRSQCLENCSCIAYSHNDGIGCMSWTGDLLDIQQFSTGGLDLYVRVPYTELADKGKNATTIITITVTIGTVIIVICGYIMWRRNSKHPGTNYAYIMLLTPAKLWRSVKSTRKKKKKALKLLNKGDTSTSDSVIQLSQVKLQEELSFFDFEDLATATNNFHRSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGLEEFMNEVVLICKLQHRNLVRLLGCCIEGDEKMLIYEYMSNKSLDAFIFDPSENKLQDWRVRCSIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMARIFGGSENQANTNRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIVSGRRNSSFYDNEQALSLLGFAWLKWKEGDILALIDPRIYDLSQHNYILRSIHIGLLCVQEQAVDRPSMAVVISMLNSEVAFLPPPSQPAFILRQNMLSSMSFEEVCRLSSINNVSITDICGR* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01594 808 PIRSF SRK 146 808 IPR024171 GO:0004674
Rops8g01594 808 PIRSF SRK 1 152 IPR024171 GO:0004674
Rops8g01594 808 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 753 - -
Rops8g01594 808 Gene3D Transferase(Phosphotransferase) domain 1 566 766 - -
Rops8g01594 808 Gene3D - 7 133 IPR036426 -
Rops8g01594 808 Pfam S-locus glycoprotein domain 162 271 IPR000858 GO:0048544
Rops8g01594 808 ProSiteProfiles PAN/Apple domain profile. 293 378 IPR003609 -
Rops8g01594 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 50 169 IPR036426 -
Rops8g01594 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 9 132 - -
Rops8g01594 808 Pfam PAN-like domain 305 363 IPR003609 -
Rops8g01594 808 Gene3D Phosphorylase Kinase; domain 1 452 565 - -
Rops8g01594 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Rops8g01594 808 CDD B_lectin 19 131 IPR001480 -
Rops8g01594 808 Pfam Protein tyrosine and serine/threonine kinase 492 759 IPR001245 GO:0004672|GO:0006468
Rops8g01594 808 ProSiteProfiles Protein kinase domain profile. 490 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01594 808 FunFam Putative G-type lectin S-receptor-like serine/threonine-protein kinase 453 565 - -
Rops8g01594 808 CDD PAN_AP_plant 289 378 - -
Rops8g01594 808 SUPERFAMILY Protein kinase-like (PK-like) 475 795 IPR011009 -
Rops8g01594 808 SMART serkin_6 490 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01594 808 ProSiteProfiles Bulb-type lectin domain profile. 13 132 IPR001480 -
Rops8g01594 808 Pfam D-mannose binding lectin 59 151 IPR001480 -
Rops8g01594 808 SMART blect_4 19 135 IPR001480 -
Rops8g01594 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 566 769 - -
Rops8g01594 808 CDD STKc_IRAK 496 762 - -
Rops8g01594 808 SMART ntp_6 305 377 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01594 Rops-Chr8 35818293 35821348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01594 385 787 Receptor kinase-like Gene Family AT4G23190 48.039 3.07e-123 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops8g01594 PK_Tyr_Ser-Thr 4.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01594 - - gmx:100779455 1159.82