Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01577 ATGCTTGATCTCCAAAGCTACCTTGTGTTATTCCTCTTATGGTTCATATCCACCATTTTCATTAGAGCCATTTTCAAAAAATCTGAATGTCTTAGACTACCCCCTGGCCCCCCAATATCACTGCCACTCATTGGACATGTTCCCTATCTCAGATCACTCCTTCATAGAGCACTCTACAAGCTTTCAAACCGTTATGGCCCTTTGATGCATGTCATGATTGGTTCAAGGCATGTCATAGTTGTTTCATCTGCTGAAATGGCAAAGCAAATTCTCAAGACTTATGAAGAGTCCTTTTGCAATCGTCCCATTATGATTGCAAGTGAGAACTTGACTTATGGTGCTGCTGATTACTTCTTCATTCCTTATGGAACATATTGGAGGTTCTTGAAGAAGCTTTGCATGACAGAGCTTCTTAGTGGGAAAACTTTGGAACATTTTGTTAACATTCGTGAGGATGAAATTCAGGCATTCCTGAAAACGATTCTTCAGATATCTACCACTGGTAAAGCAGTGGAAATGAGGCAAGAACTCATAAGGCACACCAACAACATAATTTCAAGGATGACAATGGGGAAGAAGAGTACTGGGACCACAGATGAAGTTGGTCAATTGAGAAAGTTGATTAGGGAGATTGGAGAGCTTCTTGGAGCATTTAATCTTGGTGATATTCTTGGGTTTATGAGGCCTCTAGATCTGCAAGGATTTGGGAAGAAGAACAAGAACACACATCACAAAATGGATGTGATGATGGAGAAGGTGCTGAAAGAGCATGAAGAGGTGAGGTCAAAGGAAGGTGCTGACAGTGATAGAAAGAAGGATCTTTTTGACATTTTGTTGAACTTGATTGAAGCAGATGGTGCAGATAATAAACTCACTAGAGAAAGTGCCAAAGCCTTTGCTCTGGACATGTTTATTGCTGGTACAAATGGACCTGCAAGTGTGTTAGAATGGTCACTAGCAGAGCTCATAAGAAATCCACAAGTTTTAAAGAAGGCAAGAGAAGAGATTGACTCTGTTGTTGGCAAGGATAGGCTGGTTAAAGAGTCAGATATACCAAACTTACCTTATCTCCAAGCAGTAGTTAAGGAAACTCTGAGGATGCACCCACCAACCCCAATATTTGCAAGAGAAGCTATGAAAATCTGCCAAGTTGATGGCTATGATATTCCAGCACATTCAAAGATTTTAATCAGTACATGGGCCATTGGTAGGGATCCAAACTACTGGGACAACCCAGAAGTGTATAACCCTGATAGGTTTTTAGCCACTGATGAACCTGGCAAGAGCAAAATAGATGTGAGGGGACAATATTACCAACTCTTACCATTTGGGAGTGGAAGAAGAAGCTGCCCTGGAGCTTCACTTGCATTGCTGGTTATCCAAGCAACACTGGCTAGTTTGATCCAATGTTTTGATTGGGTTGTTAATGATGGAAAGAATAATGACATTGATATGTCAGAGGAAGGAAGAGTGACTGTGTTCTTGGCCAAGCCACTGAAGTGCAAGCCTGTTCCCCGTTTTGTTCCATTCTCTGCTTGA 1539 0.4146 MLDLQSYLVLFLLWFISTIFIRAIFKKSECLRLPPGPPISLPLIGHVPYLRSLLHRALYKLSNRYGPLMHVMIGSRHVIVVSSAEMAKQILKTYEESFCNRPIMIASENLTYGAADYFFIPYGTYWRFLKKLCMTELLSGKTLEHFVNIREDEIQAFLKTILQISTTGKAVEMRQELIRHTNNIISRMTMGKKSTGTTDEVGQLRKLIREIGELLGAFNLGDILGFMRPLDLQGFGKKNKNTHHKMDVMMEKVLKEHEEVRSKEGADSDRKKDLFDILLNLIEADGADNKLTRESAKAFALDMFIAGTNGPASVLEWSLAELIRNPQVLKKAREEIDSVVGKDRLVKESDIPNLPYLQAVVKETLRMHPPTPIFAREAMKICQVDGYDIPAHSKILISTWAIGRDPNYWDNPEVYNPDRFLATDEPGKSKIDVRGQYYQLLPFGSGRRSCPGASLALLVIQATLASLIQCFDWVVNDGKNNDIDMSEEGRVTVFLAKPLKCKPVPRFVPFSA* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01577 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Rops8g01577 512 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 SUPERFAMILY Cytochrome P450 34 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 CDD CYP93 66 503 - -
Rops8g01577 512 FunFam Cytochrome P450 family protein 25 501 - -
Rops8g01577 512 PANTHER CYTOCHROME P450 98A9 9 506 - -
Rops8g01577 512 Gene3D Cytochrome P450 25 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01577 512 Pfam Cytochrome P450 34 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01577 Rops-Chr8 35513780 35515915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01577 1 506 Cytochrome P450 AT5G06900 41.650 1.42e-141 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01577 K24188 K15814 gmx:100037459 861.677