Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01554 ATGGCTTCTAATTTCTGGACATCATCTCACTACAAGCACCTTCTGGATCAAGAAGATGTGGATATGGTGAATCCGCTTGACAAAGAAAAGGGTGTCACACTTGAGGATTTTAAGCTCATTAAGATGCACATGTCCAATTATATTTTGAAATTGGCTCAACAAGTAAAAGTGAGGCAGAGGGTTGTTGCCACTGCAGTTACATACATGAGGCGTGTTTACACCAGGAAGAGTATGACAGAATATGATCCACGCCTGGTAGCTCCAACCTGCCTGTACTTGGCATCAAAAGCTGAAGAAAGCACAGTGCAGGCCCGGCTGCTTGTATTCTACATTAAAAAATTATATACTGACGATAAGTATAGGTATGAAATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAAGCACTGAACTATTACCTGGTTGTATTCCACCCCTACCGTTCCCTATCTCAGTTGCTTCAGGATGCAGGTCTGAATGATCTAAGCATGACTCAACTAACTTGGGGGCTCGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCTCCACATCTGATTGCTTTAGCTTGCATATACATTGCTAGTGTACTCAGGGAGAAAGACACCACTGCCTGGTTTGAAGAACTTCGTGTTGATATGAACGTGGTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATGGTCACTGATGAGAGAATCAATGCTGCTCTCCAGAAGCTATAA 750 0.4067 MASNFWTSSHYKHLLDQEDVDMVNPLDKEKGVTLEDFKLIKMHMSNYILKLAQQVKVRQRVVATAVTYMRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYTDDKYRYEIKDILEMEMKILEALNYYLVVFHPYRSLSQLLQDAGLNDLSMTQLTWGLVNDTYKMDLILVHPPHLIALACIYIASVLREKDTTAWFEELRVDMNVVKNISMEILDFYESNRMVTDERINAALQKL* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01554 249 Gene3D - 19 143 - -
Rops8g01554 249 SUPERFAMILY Cyclin-like 146 235 IPR036915 -
Rops8g01554 249 Gene3D - 7 237 - -
Rops8g01554 249 FunFam cyclin-C1-2-like isoform X1 19 143 - -
Rops8g01554 249 CDD CYCLIN_AtCycC_rpt1 35 141 - -
Rops8g01554 249 Pfam Cyclin, N-terminal domain 43 142 IPR006671 -
Rops8g01554 249 PANTHER CYCLIN 30 234 IPR043198 GO:0006357|GO:0016538
Rops8g01554 249 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Rops8g01554 249 PIRSF Cyclin_C_H_G 1 249 - -
Rops8g01554 249 SMART cyclin_7 149 229 IPR013763 -
Rops8g01554 249 SMART cyclin_7 46 136 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01554 Rops-Chr8 35055203 35066201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01554 60 199 Core Cell Cycle Gene Families AT5G27620 30.000 7.41e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01554 K15161 - gmx:100784345 466.077