Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01535 ATGAACGGCGGCGACAGCGATAGCGACGGCCAACTCAGCCGCCGCGTCAGCGTCAGGGACGGCGACACCTTGGATTTCCGAAACCTTAAGGTGATCTCCGCCGTGGGACGCGGCGCGAAGGGCGTGGTGTTCCTTGCTAGAACCTACGGTGCGTCGAATGGGGAGTGGTGGGCCCTGAAATTGATATCGAAAGCGCTTCTTCAGAAGAAGGTTAAGAACCGAAGCGGCGAGTGTAAGAGGGTATCGTTTGAACAGCAAATACTACGTCGTTTGGATCACCCTCTCTTGCCGTGTTTGCGAGGGGTTGTTGAAACCGAGAAGCTAATTGGGTACGCCATTGATTATTGTCATGGTGGGAATTTGCATTCTCTACGCAAGAAGCAATCTGAGAAGGTGTTCTCTGAAGAAACTATCAGGTTTTATGCCGTTGAATTGGTACTGGTGTTGGAGTATTTACACAATTTGGGAATAGTGTATAGAGATTTGAAGCCTGAGAACATCATGATTCAACAAACGGGTCACATAATGCTAGTGGATTTTGACCTTTCCAAGAAGCTGAACTCAAAGTCACCCAACTCACTGAGTTGCAACTCGTCCCCGGGTTCTGACTCTTCTTCGGAGAAAAGAAAGCGACGGTTCTCGCCGTTCTCATGCTACTCGCGTCCACCGTATATTCCTCAGAATGAAGTTGAGGATAGAGCGGGGTTTTCAAGAAAAGATGTGGAGTCTTTTGTCCATGGGATATTTTTCCCAAAGAATAATAGCAGTGAAGGAGAGAAAAACAATGAGGGTAAGGAAAAGAAAGAGGAGAATAGCAATCATAATAGTAACCAGAATGTTTGGGTTGAGAAGTTGAATCAGAATTCCACCAAGGAAGAAAATTTTTTGATTTTTTGA 897 0.4627 MNGGDSDSDGQLSRRVSVRDGDTLDFRNLKVISAVGRGAKGVVFLARTYGASNGEWWALKLISKALLQKKVKNRSGECKRVSFEQQILRRLDHPLLPCLRGVVETEKLIGYAIDYCHGGNLHSLRKKQSEKVFSEETIRFYAVELVLVLEYLHNLGIVYRDLKPENIMIQQTGHIMLVDFDLSKKLNSKSPNSLSCNSSPGSDSSSEKRKRRFSPFSCYSRPPYIPQNEVEDRAGFSRKDVESFVHGIFFPKNNSSEGEKNNEGKEKKEENSNHNSNQNVWVEKLNQNSTKEENFLIF* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01535 298 MobiDBLite consensus disorder prediction 189 214 - -
Rops8g01535 298 Gene3D Phosphorylase Kinase; domain 1 29 119 - -
Rops8g01535 298 Pfam Protein kinase domain 31 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01535 298 PANTHER FLIPPASE KINASE 1-RELATED 15 218 - -
Rops8g01535 298 SMART serkin_6 29 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01535 298 FunFam Serine/threonine-protein kinase OXI1 120 188 - -
Rops8g01535 298 MobiDBLite consensus disorder prediction 258 273 - -
Rops8g01535 298 MobiDBLite consensus disorder prediction 249 286 - -
Rops8g01535 298 ProSiteProfiles Protein kinase domain profile. 29 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01535 298 MobiDBLite consensus disorder prediction 189 203 - -
Rops8g01535 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Rops8g01535 298 SUPERFAMILY Protein kinase-like (PK-like) 21 192 IPR011009 -
Rops8g01535 298 Gene3D Transferase(Phosphotransferase) domain 1 120 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01535 Rops-Chr8 34624120 34626005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01535 23 230 AGC Kinase Gene Family AT3G25250 54.028 2.71e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops8g01535 Pkinase 1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01535 K20714 - gmx:100813693 272.322