Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01533 ATGTACATAGGTATTAGCTTAACTACAGGAAGTGTCTTGCAATTTAAAACCCTAGCTCCCTCCCACTGCCTCTTCTGGGTTCATTACATCTCTCTGCTAAGTTCTGAGAAGAACATCGTTACAAGCAGAGTCAAGATGGCTGTCCCCTTGCTAAGCAAGAAAATTGTGAAGAAGCGTGTGAAGAAGTTCAAGAGGCCCCAAAGTGACAGGAAAATTTCTGTTAAGCCCAACTGGCGTAGGCCCAAGGGTATTGATTCACGTGTAAGGAGAAAGTTCAAAGGATGTACTTTGATGCCAAACATTGGTTATGGTTCAGACAAGAAGACCCGCCACTATCTGCCTAATGGATTCAAGAAGTTTGTTGTCCACAATGTCAAGGATCTTGAACTTCTGATGATGCACAACAGGACATACTGTGCTGAGATAGCACACAATGTATCAACCAGGAAAAGAAAGGAGATTGTAGAGCGTGCAGCACAGTTGGATGTTGTTGTCACCAACAAACTTGCCAGGTTGCGCAGCCAAGAGGATGAGTGA 537 0.4413 MYIGISLTTGSVLQFKTLAPSHCLFWVHYISLLSSEKNIVTSRVKMAVPLLSKKIVKKRVKKFKRPQSDRKISVKPNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVKDLELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01533 178 SMART Ribosomal_L32e_2 60 167 IPR001515 GO:0003735|GO:0005840|GO:0006412
Rops8g01533 178 SUPERFAMILY Ribosomal protein L32e 41 176 IPR036351 -
Rops8g01533 178 CDD Ribosomal_L32_L32e 67 167 IPR001515 GO:0003735|GO:0005840|GO:0006412
Rops8g01533 178 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 46 178 IPR001515 GO:0003735|GO:0005840|GO:0006412
Rops8g01533 178 Pfam Ribosomal protein L32 61 167 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01533 Rops-Chr8 34605191 34608213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01533 46 178 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 86.466 4.47e-85 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01533 K02912 - nnu:104586297 255.373