Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01510 ATGGTGTGCATGCTCTTGACAAGCAATAGTTTGGTTTCGGAACTTGTGCTTACATTTGTACCTTCTGTACTTCTACCTAACAAGATGGCTAACATGTTCTACTTCTACTTGGTCTTGCTTCACATTTTCCTGAGCTTTGTGCTGACTCTATCAGCACCTGAAGGGTCTCTTATAACCAAGGTTCCAGGCTTCAATGGCACTCTACCTTCCAAGCACTATGCTGGGTATGTGACAGTGGATGAAATTCATGGAAAAAACTTGTATTACTATTTTGTTGCATCAGAAGGCAAACCGTCTGAAGACCCAGTGGTTCTTTGGCTTAATGGTGGACCGGGATGCTCTAGCTTCCATGGCTTCGTATATGAGCATGGTCCTTTTAAGTTTATAAAACCAAAGACTAAGGGAACCCTGCCCACGTTGCAACTCAATCCATACAGCTGGTCAAAGGTTTCCAACATTATATATTTGGATTCTCCTGCTGGAGTGGGGTTTTCATACTCAAAGGATAAATCTGATTACAAAACTGGAGATGTCAAGACTGCCTCTGATACACATAATTTTCTCCTCAAGTGGTTTGAACTATACCCTGAGTTCCTTCCAAATCCATTCTTCATTGCTGGAGAGTCATATGCTGGGGTTTATGTGCCTACTCTTGCTGATAAAGTAGTGGAAGGAATTGAAGCTGGTATAAAGCCTAATCTGAATTTCAAGGGTTACATGGTTGGAAATGCTGCAACCGATGAAGAATTTGATGGCAATGCTCTTGTTCCATATGCACACGGGATGGGTTTGATCAGTGATGAATTGTTCGAGGATATCACAAGACAGTGCAAAGGGAAATTCTATGGTCCAGTCAGTCATAAGTGCGTCGATGTGCTGTTAAAAATTGATAAGGAAATTGATGGTTTAAACATATATAACATTCTGGAACCATGTTATCGTGGTGGTGGAGAGACAGGGGAGAATGAAAAGTCCAATTCTAAGTTGCCATTCAACTTTAGGGAGTTGGGTGAGACTGGTAGATCTCTGACTGTGAGGAAAAGGATGTTTTCTTGGCCCCTCAGAGCTCCTGTGAAAAATGGAATAGTACCAACTTGGCCACAACTCACAAATTCTATGCACGTTCCATGCATTGATGATGAGGTTGCATCCTCATGGCTGAACAATGGAGAGGTCAGGAGAGAAATTCACACTGTACAGGAAAGTGTGGTCAGTGAGTGGAACTTATGTTCAGACAAAATTAAATACAATCATGATACTGGGAGCATGATCCAGTACCACAAGAAACTAACTTCCAAAGGATATAGAGCACTTGTATACAGTGGTGACCATGACATGCGTATCCCATTCATTGGAAGCAAAGCATGGATTAGATCAATTGGATATAAGATTGTTGATGAATGGAGGCCTTGGTCAGTCAATGATCAAGTTGCCGGGTTTACACAAGGATATGATAAAAATCTCACTTTTCTGACAATAAAGGGAGCTGGGCATACTGTTCCAGAGTGTAAACCACAGGAGTCATTGTATTTTTACAAACATTTTCTGGCTGGATTGCCTATATAA 1566 0.4138 MVCMLLTSNSLVSELVLTFVPSVLLPNKMANMFYFYLVLLHIFLSFVLTLSAPEGSLITKVPGFNGTLPSKHYAGYVTVDEIHGKNLYYYFVASEGKPSEDPVVLWLNGGPGCSSFHGFVYEHGPFKFIKPKTKGTLPTLQLNPYSWSKVSNIIYLDSPAGVGFSYSKDKSDYKTGDVKTASDTHNFLLKWFELYPEFLPNPFFIAGESYAGVYVPTLADKVVEGIEAGIKPNLNFKGYMVGNAATDEEFDGNALVPYAHGMGLISDELFEDITRQCKGKFYGPVSHKCVDVLLKIDKEIDGLNIYNILEPCYRGGGETGENEKSNSKLPFNFRELGETGRSLTVRKRMFSWPLRAPVKNGIVPTWPQLTNSMHVPCIDDEVASSWLNNGEVRREIHTVQESVVSEWNLCSDKIKYNHDTGSMIQYHKKLTSKGYRALVYSGDHDMRIPFIGSKAWIRSIGYKIVDEWRPWSVNDQVAGFTQGYDKNLTFLTIKGAGHTVPECKPQESLYFYKHFLAGLPI* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01510 521 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 59 505 IPR001563 GO:0004185|GO:0006508
Rops8g01510 521 FunFam Carboxypeptidase 423 518 - -
Rops8g01510 521 FunFam Carboxypeptidase 376 520 - -
Rops8g01510 521 ProSitePatterns Serine carboxypeptidases, histidine active site. 488 505 IPR033124 GO:0004185
Rops8g01510 521 SUPERFAMILY alpha/beta-Hydrolases 58 520 IPR029058 -
Rops8g01510 521 Pfam Serine carboxypeptidase 62 517 IPR001563 GO:0004185|GO:0006508
Rops8g01510 521 Gene3D - 373 520 - -
Rops8g01510 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 191 216 IPR001563 GO:0004185|GO:0006508
Rops8g01510 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 166 IPR001563 GO:0004185|GO:0006508
Rops8g01510 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 155 IPR001563 GO:0004185|GO:0006508
Rops8g01510 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 488 501 IPR001563 GO:0004185|GO:0006508
Rops8g01510 521 ProSitePatterns Serine carboxypeptidases, serine active site. 205 212 IPR018202 GO:0004185
Rops8g01510 521 Gene3D alpha/beta hydrolase 51 354 IPR029058 -
Rops8g01510 521 FunFam Carboxypeptidase 51 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01510 Rops-Chr8 34021907 34028908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01510 382 521 Calmodulin-binding Proteins AT2G22960 42.857 3.89e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01510 K16296 - gmx:100792057 751.895