Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01505 ATGGGCTGGTTAGCATATAGATGCTTAAGAGATCTTAGTCTCGTAACGTACCCTCTGCTGTCTCACATGGATTTGGACAAGGGAAATGAAGCAGAACATAGCTGTCTAGAAGAGAGCACAAGTATATTTGATGGAGTTGAAGTGCAAGAGCCATATGTGGGCATGGAATTTGATTCTGAAGAAGATGCCAGGAAATTTTACGTTGAATATGCCAGACGAGTAGGATTTGTTGTACGCATTATGCAACGTCGACGTTCTGGTATTGATGGGAAGACTCTTGCTCGCAGACTTGGATGTAACAAACAAGGATTCTCACCAAATAACAAGGGAACATTGGGGCCAGAGAAAAAACCAAGACCTAGTGCTAGAGAAGGTTGCAAGGCAACAATTTTGGTGAAGTTGGAAAAATCTGGAAAATGGGTTGTCACAAGATTTATAAAGGATCATAACCATCCTCTAATTGCTACAGCTAATGGGTTCAGCACAGCGGGTGATAAAGACAAGAAAATTGCAGAACTTACTATTGAGTTAGAGCGCCAAGATCAACTGTGCGCAGCTTATCGAGAAAAACTACTCAGCTTCATAAACAATGTTGAGGAGCAAACAGCGGAATTGTCCACAAAAATTCAACTCATTGTTGAAAATATTAGGAGAGCTGAGTTGGAAATGAAAAAGTGTTCCCAGAACAGAAAGCCTTGGAGCTTAACTTGA 711 0.4107 MGWLAYRCLRDLSLVTYPLLSHMDLDKGNEAEHSCLEESTSIFDGVEVQEPYVGMEFDSEEDARKFYVEYARRVGFVVRIMQRRRSGIDGKTLARRLGCNKQGFSPNNKGTLGPEKKPRPSAREGCKATILVKLEKSGKWVVTRFIKDHNHPLIATANGFSTAGDKDKKIAELTIELERQDQLCAAYREKLLSFINNVEEQTAELSTKIQLIVENIRRAELEMKKCSQNRKPWSLT* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01505 236 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 217 - -
Rops8g01505 236 Pfam FAR1 DNA-binding domain 65 154 IPR004330 -
Rops8g01505 236 Coils Coil 170 190 - -
Rops8g01505 236 Coils Coil 209 229 - -
Rops8g01505 236 MobiDBLite consensus disorder prediction 101 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01505 Rops-Chr8 33897710 33905611 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops8g01505 FAR1 2.5e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01505 - - vun:114183030 387.497