Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01490 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACGCTGTGCACCGAAAATCCGGGCGATCCGCCAGCTTCAATCAGCAGCGAGGTTCCTCCGGCGGTGCCTACGTCAAGGGCGGCGGCGGCGCGGCCGTGCCTTCACCCTCACTCTCCTCTAGCCGGAGTTTTAACAAGAAGTCTAATAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTACCCCGGTGAATTCAGCTGAATCTAATACTGCTTATGCAGCCCGGACCACACCGAATGGTAGCCATGTACAGCCTCAATTTCATGGAGGATCTGATGCACCAGTTACAAATGCAACTGCCAAGTCATCTGAATCATCAGCTGCACAGAGGAGCACCAGAGTTGTTCCAAAAGCTCCTACTTCTCAACCTCCCACCGTGAGCTCTGATTCAGCAGCTCCTACGACCCCTGCTAAAGGAGATGCATCCAAGGCATTCCCCTTCCAGTTCGGATCTATTAGTCCTGGCTTTATGAATGGGATGGCAATTCCTGCTCGCACAAGCTCAGCTCCTCCTAATATAGATGAGCAGAAGCGTGATCAGGCTCGTCATGATTCTTTTAGACCTGTGCCTTCAATGCCAACACCTCCTGTTCCAAAGCAGCAGCCAGCAAAGAAAGATATAGGTGTTGCTGACCAATCTAATGCTGGGGAAACTCATACAGGGACCAGGGCTAAAAAGGATACTCAAGTGTCACCTTTACCCCCAGCAAGCCAGATGCAGAAGCCTTCTGTTATTCCTCTAACTGGAATTTCAATGGCAATGCCATATCATCAGTCACAGGCATCTGTACACTTTGGTGGTCCTAATCCACAGATTCAATCTCAGGGTATGTCAACAACACCTCTTCAGATGCCTTTACCGATGCCCTTACCAATTGGAAACGCTGCACAAGTGCAACAGCAGGTTTTTGTTCCAAGTCTTCAACCTCATCCTATCCATCCTCAAGGAATCATGCATCAAGGCCAAAGCATGGGTTTCACTCCTCAAATGGGTCCTCAATTGCCCCATCAGTTAGGAAGCATGGGCATGGGTATTGGCATCAGCCCACAATATCCCCCACAGCAAGGGGGGAAATTTACTGGTTCTCGTAAAACTACTCCTGTCAAAATAACTCATCCTGAGACACATGAAGAGCTTAGACTTGATAAAAGGGCAGATGCACATTCAGATGGTGGGTCATCTGGTGCTAGGTCTCATTCTGGCATGCCTTCTCAATCTCAGTCTGTCCAGCCATTTGCTGCTTCTCATCCTATCAACTACTATCCATCCAGTTCCTACAGTACCAGTTCTCTCTTTTATCCGACTCCTAGTTCTCTTCCATTATCAAGTAGCCAGATAACTCCTAACTCTCAGCCACCAAGATTTAATTATGCTGTGAGCCAGGGTCCGCAAAATGTTGGTTTCATGAATCCATCATCTCATAGTTCCCTACCAGTTAATAAAACTGGCACTCCTATTCCTGGCAATATTGAACCATCTAATCCAGAATTTTCCCTCGATGTGCATAATGCAACCTCAGGAGTAACTTCCGTGTCTATTAAGCCAAGCAGTGGGTCTTTTGTTGTTGACTCATCATTTGCCAATTCCAGTATTTCTGGTGCTCAGAAGAGTGGGTCTCCTAGTTCTTCAGTAACATCTGGTGATGTTAGCTCATCTGTGCCACCAAAAGGATCTGAAACTTGTTCTGAAATCTCTTCACAATCTACTGCTGCATCTGCCGAGAAGCTTACATCAGCTTCCTTGTTGTCTTCATCTGCTGTGACTGAGGATTCTGTTTCAGTTGCATCTAATAATGAAGGCAGAAAGAAGGAATCCCTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGAAACTACAAAAGAAAGGCCAATTGCAGCATCAGGTTGCTATACAATCTCCTGCTGTGGCTAATGAACCTTCCCAAGCTGTTGATGGTGATAGTGGAGTTTCTGAAACTGTAGGAACTAAAACAAATCATTCTGCAGCGATAGCCAATGAAGATCTCTCGGCAGCAGCTTCAGACACATTATCAGCAACCAGTGAGAACATACCTAATGTTGTTGAAATTAAGACTGATGGTTCTACACAGGTTTCTGCTAGCGCTTCAACTGAAGGATCTGTTAATCAAGCTGTGGATAGTTTGAACAATCATAAAAATGATGAGCTAGATAAATTATCACACCAGGATAAATTGTTAAGGCAGAACATTTTGGAAATGGGTGGTGACACTGAAATTTCATCTCTTCAGAAATGTAAAAATATCAGTGATGCTGGAACGGAATTTAAACAACCTGAACAAGGTGCTGCAAAGTCAAGCACTGAGGTTGTAACCTTGACGACTGGACAGCAAGGGCAGGATGAATCTACAAGTTGTAGTGCAAAATGTGACAGGATGGATGATAATATAGGCGTGTCTACCTCTACTACATTGGATTCTAAATATGTCTCTTTAAACAGAGATGATAGTGTAGTTAGTAATGAAGCTATTGCTACAAATTCAGGCACATCAGATCAGCAATATGCTGATCTTCTAGAAGCAACTTCAAAGCATTGCAAGGATAGTTCAGAGAATGCTGGCAGTGGCTCAGTGTCTCTTCCAGCAGCATCAGGTGCCAAGGAACGACCAATTTTAGAGCTGAATAAGGCAAAAACTGCAACTAAGGGGAGAAAGAAACTGAAAGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACATCCGATCTTTATAATGCATACAAGGGACCTGAGGAAAAGAAAGAAGCTGTTGTAAGTTCAGAGAAAACTGAAAGTGCTTCTTCTTCTGAAAATTTGGAGCAGTTGCCTACGGATGCTGCTCAGCCAGATGCTATTGCAAGTGAGCAATCTGGGCAGAGTAAAGCTGAACTTGACTGGGAGGATGCTGCTGACATGTCTACACCAAAGCTAGAAGTTTCTGATAAAACTCAACAGGTTAGTGATGGAAGTGCAGTTACTTCCAAAAAGTACTCCCGAGACTTCCTTTTGAAATTTGCAGAGCAATGCACTGATCTTCCTGAAGGGTTTGAAATCACGGCAGACATAGCTGAGGCTTTGATGAGTACTAATATTAGTTCTCATCATGTTGAACGTGATTCACATCCTTCTGGTGGAAGAATTATAGATAGGGCAGGTGGGATATCTCGGATGGATCGTCGTGGGAGTGTTGTTGAGGAAGACAAATGGGGCAAAGTTTCTGGTGCTTTTCATTCCGGTATGCGTTTGGATGGTATTGGAGGTAATGCGGGATTTCGACCTGGCCAAGGAAGCAATTTTGGTGTTTTACGTAATCCACGTGCACAGCCACCTCTGCAATATGCTGGAGGGATTCTTTCTGGGCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCCCTGATAGTGAAAGGTGGCAGCGTACTGCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTCAATCTCCTCTACAGATGATGCACAAAGCTGATAAGAAGTATGAGGTGGGTAAAGTGACAGGTGAGGAAGAGGCGAAGCAGAGGCAGTTGAAAGGTATATTGAACAAGTTAACTCCTCAGAATTTTGAGAAGCTTTTTGAGAAGGTAAAAGCAGTTAATATTGACAATGCACTCACTCTCACTGGTGTCATCTCACAAATTTTTGAGAAGGCCTTGATGGAGCCTACCTTTTGTGAAATGTATGCCAATTTCTGCTTCCGTCTGGCAGCTGAATTGCCTGATCTCAGTGAAGACAATGAAAAGATAACTTTCAAGAGATTATTGTTAAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGCTGATGAGGGTGAGGTGAAACAGACTGATCAGGAAAGAGAAGAGAAACGAACCAAGGCTCGAAGACGCATGTTGGGTAATATCAGATTGATTGGCGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGATGAGTGCATCAAGAAGTTACTGGGTCAGTATCAGGATCCTGATGAAGAAGATATTGAAGCTTTGTGCAAACTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAGATTGTTATCAACAAACATGAATTTATCTTCTAGGGTAAGGTTCATGTTGAAGGATGTCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGAAAAGTTGAAGGTCCTAAGAAGATTGAAGAGGTGCACAGAGATGCTTCCCAAGAGAGGCAGGCCCAAGCTGGTAGGCTGGGTCGTGGTCCGGGCAACAATTCAGCAAGAAGGATCCCTATGGATTTTGGTGGAAGAGGGTCATCTATGTTACCTTCTCCTAATGCTCAGATGGGTGGACTGCGTGGGTTGCCTTCTCAAGTTCGTGGGTTTGGTTCTCAGGATGCTCGTACGGATGATAGGCAATCATATGAGGCCAGGACATTGTCAGTTCCCTTGCCTCAAAGACCTTTAGGTGATGATTCAATAACCTTGGGACCCCAGGGTGGTCTCGCTAGAGGAATGTCCATTAGAGGTCCACCTGCAGTTTCAAGTTTGACTGGTCTTAATGGTTATAGTAATTTAGCAGAGCGTACTCCTTACAGCTCCAGGGAGGACCTTACACCAAGATATGTTCCAGATAGATTTGCTGGTCAAACTCCCTATGATCAATCAAGTGTTCAAGAGCGTAATATGAATTATGGTAACAGGGACTTGAGAAATGCAGATAGGATTCTTGATAGACCTGTTGTAACTTCACCTCCTGCCCAAGCACAAGGGACAGCAGGCTCCCAGAACACTTCTTCCGAGAAGGGTTGGCCAGTAGAGCGACTGCAGGACATGTCCATGGCAGCAATCAGAGAATACTATAGTGCAAGAGATTTGAACGAAGTTATTCTGTGTGTCAAAGATCTGAAGTCACCAAGCTTTCATCCTTCTATGGTTTCTGTCTGGGTCACGGATTCGTTTGAGAGAAAGGACACAGAGAGAGATCTTTTGGCCCAACTGCTAGTCAACCTTGTGAAATCCAATGATGGCACCTTAAGTCAGGGCCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGTACTTTGGAAGATGCGGTTAATGATGCCCCGAAAGCACCGGAGTTTCTTGGCCGCATTTTTGCCAAAGCTATAACAGAGCATGTAGTCTCTCTGAAAGAAATTGGGCGGTTAATACATGATGGAGGAGAGGAACCAGGCAGGCTATTGGAAGTTGGACTTGCAGCTGATGTTCTTGGAAGCACCTTGGAAGTAATAAAAATGGAGAAGGGTGATACCGTCTTGAATGAGATCCGGACAAGCTCCAACTTGCGGTTGGAGACCTTCCGGCCACCGGTTCCTATTACATCAAGGAAGTTAGAGAAATTCATTTAG 5481 0.445 MSFNQSKSDKSDAVHRKSGRSASFNQQRGSSGGAYVKGGGGAAVPSPSLSSSRSFNKKSNNNAQGGQSRVNPTPVNSAESNTAYAARTTPNGSHVQPQFHGGSDAPVTNATAKSSESSAAQRSTRVVPKAPTSQPPTVSSDSAAPTTPAKGDASKAFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQKRDQARHDSFRPVPSMPTPPVPKQQPAKKDIGVADQSNAGETHTGTRAKKDTQVSPLPPASQMQKPSVIPLTGISMAMPYHQSQASVHFGGPNPQIQSQGMSTTPLQMPLPMPLPIGNAAQVQQQVFVPSLQPHPIHPQGIMHQGQSMGFTPQMGPQLPHQLGSMGMGIGISPQYPPQQGGKFTGSRKTTPVKITHPETHEELRLDKRADAHSDGGSSGARSHSGMPSQSQSVQPFAASHPINYYPSSSYSTSSLFYPTPSSLPLSSSQITPNSQPPRFNYAVSQGPQNVGFMNPSSHSSLPVNKTGTPIPGNIEPSNPEFSLDVHNATSGVTSVSIKPSSGSFVVDSSFANSSISGAQKSGSPSSSVTSGDVSSSVPPKGSETCSEISSQSTAASAEKLTSASLLSSSAVTEDSVSVASNNEGRKKESLSRSNSLKDNQKKLQKKGQLQHQVAIQSPAVANEPSQAVDGDSGVSETVGTKTNHSAAIANEDLSAAASDTLSATSENIPNVVEIKTDGSTQVSASASTEGSVNQAVDSLNNHKNDELDKLSHQDKLLRQNILEMGGDTEISSLQKCKNISDAGTEFKQPEQGAAKSSTEVVTLTTGQQGQDESTSCSAKCDRMDDNIGVSTSTTLDSKYVSLNRDDSVVSNEAIATNSGTSDQQYADLLEATSKHCKDSSENAGSGSVSLPAASGAKERPILELNKAKTATKGRKKLKEILQKADAAGSTSDLYNAYKGPEEKKEAVVSSEKTESASSSENLEQLPTDAAQPDAIASEQSGQSKAELDWEDAADMSTPKLEVSDKTQQVSDGSAVTSKKYSRDFLLKFAEQCTDLPEGFEITADIAEALMSTNISSHHVERDSHPSGGRIIDRAGGISRMDRRGSVVEEDKWGKVSGAFHSGMRLDGIGGNAGFRPGQGSNFGVLRNPRAQPPLQYAGGILSGPMQSMVNQGGMQRNSPDSERWQRTASFQQRGLIPSPQSPLQMMHKADKKYEVGKVTGEEEAKQRQLKGILNKLTPQNFEKLFEKVKAVNIDNALTLTGVISQIFEKALMEPTFCEMYANFCFRLAAELPDLSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQTDQEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHDECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERMRLLSTNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDASQERQAQAGRLGRGPGNNSARRIPMDFGGRGSSMLPSPNAQMGGLRGLPSQVRGFGSQDARTDDRQSYEARTLSVPLPQRPLGDDSITLGPQGGLARGMSIRGPPAVSSLTGLNGYSNLAERTPYSSREDLTPRYVPDRFAGQTPYDQSSVQERNMNYGNRDLRNADRILDRPVVTSPPAQAQGTAGSQNTSSEKGWPVERLQDMSMAAIREYYSARDLNEVILCVKDLKSPSFHPSMVSVWVTDSFERKDTERDLLAQLLVNLVKSNDGTLSQGQLIKGFESVLSTLEDAVNDAPKAPEFLGRIFAKAITEHVVSLKEIGRLIHDGGEEPGRLLEVGLAADVLGSTLEVIKMEKGDTVLNEIRTSSNLRLETFRPPVPITSRKLEKFI* 1827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01490 1826 Gene3D - 1635 1826 - -
Rops8g01490 1826 SMART ma3_7 1639 1753 IPR003891 -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 1615 1632 - -
Rops8g01490 1826 SMART if4_15 1194 1417 IPR003890 GO:0003723|GO:0005515
Rops8g01490 1826 MobiDBLite consensus disorder prediction 365 380 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 225 253 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 1422 1441 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 919 954 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 613 633 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 889 905 - -
Rops8g01490 1826 ProSiteProfiles MI domain profile. 1638 1762 IPR003891 -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 864 905 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 381 402 - -
Rops8g01490 1826 Pfam MIF4G domain 1194 1417 IPR003890 GO:0003723|GO:0005515
Rops8g01490 1826 SUPERFAMILY ARM repeat 1189 1419 IPR016024 -
Rops8g01490 1826 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 356 1826 IPR045208 GO:0003743
Rops8g01490 1826 MobiDBLite consensus disorder prediction 1422 1474 - -
Rops8g01490 1826 Coils Coil 1276 1296 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 1285 1314 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 1 253 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 939 954 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 1613 1632 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 18 32 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 45 147 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 634 667 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 599 667 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 483 510 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 542 578 - -
Rops8g01490 1826 FunFam Eukaryotic translation initiation factor 4G 1194 1430 - -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 365 423 - -
Rops8g01490 1826 Pfam MA3 domain 1645 1751 IPR003891 -
Rops8g01490 1826 MobiDBLite consensus disorder prediction 405 423 - -
Rops8g01490 1826 SUPERFAMILY ARM repeat 1632 1816 IPR016024 -
Rops8g01490 1826 FunFam Eukaryotic translation initiation factor 4G 1632 1825 - -
Rops8g01490 1826 Gene3D - 1194 1430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01490 Rops-Chr8 33538520 33547718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01490 1 1825 Eukaryotic Initiation Factors Gene Family AT3G60240 43.707 0.0 1233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01490 K03260 - gmx:100796636 2730.67