Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01485 ATGCAACTCAATAGGTTATGCATTGTTTTACCTCCAAAATCTGGTGAAATGGAACAACCTGAAAAGGGTGTGAAACAAGTTGTTCAATGTGCCAAAATACAAGTTAAGGCCAAAAAGCCTCACAGCAATAAGAAAACATCAAGCAGAATTGATCATTTCAGGTTGGGGGAGACATCAAGGATTGGTGGCACAATTGGGTATTTGCCCCCTGAAAGCTTGCAAAAACCAAGCAATGCTACCTCCAAATCCGATGTCTTCAGTTTTGGGATAGTTGTGCTAGAGGTGGTTTCTGGAAGGAAAGCAATAGATCTCAAATACCCAGATGATCAAATCATTTTGCTTGATTGGATCAGAAGGCTTTCTGATGAAAGGAAGCTTCTGGAGGCAGCTGATAGTAGACTACCAAATGGATCCTACATGCTTTCTGAGATGCAGCATTTAATTCACATAGGCCTTCTTTGCACACTCCATGACCCACAATTGAGGCCAAACATGAAATGGGTTGTGGAAGCACTTTCTGACATTTGTTTCAAATTGCCAGCACTACCTTCATTTCTCTCCCACCCTCTTTATATCTCTTTGTCTTCCCCTTCTGAGACTAGTCCCAGTAGCACAAGTGGTACTAGCTCAGCCACAGAGAATGCTAGCATAATCACCAATTACACTTCATCCAACTATGTCACAGCTGCAGGGGAAACAGTATATGTAACTGCTGAATACAAAAACAGTGAAATAATCTCTTCTAAGAGCATGAATCACCAGCCACCATTTCCTGTGGTTGAAACTCCAAGGGAAGTATCCTACAAGGAGATTGTTTCTGCTACAGATAACTTTTCAGAGTCAAGAAGGGTTGCTGAGCTAGACTTTGGAACTGCTTATCATGGCATCCTTGATGATAGTTACCATGTTTTGGTGAAACGCTTGGGGATGAAGACATGTCCTGCATTGCGTGATAGATTCTCCAATGAACTCAGGAATCTAGGAAGGCTTCGCCACAGGAATTTGGTGCAACTTCGTGGATGGTGCACTGAACAAGGAGAGATGCTTGTACTTTATGATTACTCAGCTACTAGAATTCTCAGCCATCAACTTCTTCATCATAATAATGGTAGAACTGGCTATTCTGTCCTCCAATGGCATCACAGGTACAACATAGTGAAAGCACTTGCCTCTGCAGTTCTCTATCTACATGAGGAATGGGATGAACAAGTGATCCACAGAAACATTACATCCTCAGCTGTCATTCTTGAACCAGATATGAACCTAAGACTCAGCAATTTTGCTCTAGCTGAATTTTTGTCAAGGAATGCACATGGTCATCATGCAGTCACTGATTCTAGCAAATCGGTTCGGGGGATTTTCGGTTACATGTCACCGGAATATGTGGAATCTGGTGAAGCAACACCTGCAGCTGATGTTTATAGTTTTGGTGTGGTGGTTCTTGAAGTTGTGAGTGGACAAATGGCAGTGGATTTCAGGCAGAAGGAGGTGCTTTTGGTGAAGAAGGTTCATGAATTTGAGATGAAAAAAAGACCATTGGAGGAGTTAGCTGACATAAGACTCAATGGAGAGTACAACTACAAAGAACTAATGAGGTTGGTGAGATTAGGAATTGCATGCACCCGTTGTAATCCTCAATTAAGACCAAGCATGAGACAAATAGTGAGCATCCTTGATGGCAATGACAAATTATTGGACCAGAAAAACAAGGAGAGCAGGGAAGAATGGAGACAAAGAAATGCTAGTTCTTTGTCAATGATTAGGGGAATCCAAGCTCTAGGAATACAGTAA 1791 0.4193 MQLNRLCIVLPPKSGEMEQPEKGVKQVVQCAKIQVKAKKPHSNKKTSSRIDHFRLGETSRIGGTIGYLPPESLQKPSNATSKSDVFSFGIVVLEVVSGRKAIDLKYPDDQIILLDWIRRLSDERKLLEAADSRLPNGSYMLSEMQHLIHIGLLCTLHDPQLRPNMKWVVEALSDICFKLPALPSFLSHPLYISLSSPSETSPSSTSGTSSATENASIITNYTSSNYVTAAGETVYVTAEYKNSEIISSKSMNHQPPFPVVETPREVSYKEIVSATDNFSESRRVAELDFGTAYHGILDDSYHVLVKRLGMKTCPALRDRFSNELRNLGRLRHRNLVQLRGWCTEQGEMLVLYDYSATRILSHQLLHHNNGRTGYSVLQWHHRYNIVKALASAVLYLHEEWDEQVIHRNITSSAVILEPDMNLRLSNFALAEFLSRNAHGHHAVTDSSKSVRGIFGYMSPEYVESGEATPAADVYSFGVVVLEVVSGQMAVDFRQKEVLLVKKVHEFEMKKRPLEELADIRLNGEYNYKELMRLVRLGIACTRCNPQLRPSMRQIVSILDGNDKLLDQKNKESREEWRQRNASSLSMIRGIQALGIQ* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01485 596 SUPERFAMILY Protein kinase-like (PK-like) 250 558 IPR011009 -
Rops8g01485 596 Gene3D Transferase(Phosphotransferase) domain 1 361 586 - -
Rops8g01485 596 Gene3D Transferase(Phosphotransferase) domain 1 31 177 - -
Rops8g01485 596 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 262 574 - -
Rops8g01485 596 FunFam Receptor like protein kinase S.2 24 178 - -
Rops8g01485 596 FunFam Receptor like protein kinase S.2 356 581 - -
Rops8g01485 596 SUPERFAMILY Protein kinase-like (PK-like) 57 206 IPR011009 -
Rops8g01485 596 ProSiteProfiles Protein kinase domain profile. 278 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01485 596 Gene3D Phosphorylase Kinase; domain 1 235 354 - -
Rops8g01485 596 FunFam Receptor like protein kinase S.2 238 354 - -
Rops8g01485 596 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01485 596 Pfam Protein tyrosine and serine/threonine kinase 283 557 IPR001245 GO:0004672|GO:0006468
Rops8g01485 596 Pfam Protein tyrosine and serine/threonine kinase 64 172 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01485 Rops-Chr8 33475295 33478151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01485 263 566 Receptor kinase-like Gene Family AT5G65600 36.624 1.85e-59 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Rops8g01485 PK_Tyr_Ser-Thr 6.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01485 - - gmx:100796108 919.457