Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01466 ATGGCACAACCCATTTTGCCAAAGTTTATAGCCACCCCAGGATATCTTTCACCAGAATATGTTTCGTGTGGGAATTCTTCTAAGACCTCTGATGTTTACAGCTTTGGAATTTTGCTTTTGGAGATTATTAGTGGCAGGAATCCAAATGAGAAACTCACAAGGAAAATGAAAAAGGATATTGTTCAATGGGTCACACCATATGCCAACAAGGGTCTCTTCAATAATATTGAAGAATAG 237 0.3797 MAQPILPKFIATPGYLSPEYVSCGNSSKTSDVYSFGILLLEIISGRNPNEKLTRKMKKDIVQWVTPYANKGLFNNIEE* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01466 78 Gene3D Transferase(Phosphotransferase) domain 1 2 78 - -
Rops8g01466 78 PANTHER OS01G0253100 PROTEIN 9 70 - -
Rops8g01466 78 ProSiteProfiles Protein kinase domain profile. 1 78 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01466 78 SUPERFAMILY Protein kinase-like (PK-like) 8 63 IPR011009 -
Rops8g01466 78 Pfam Protein kinase domain 7 62 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01466 Rops-Chr8 32914957 32915193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01466 11 66 Receptor kinase-like Gene Family AT1G52310 49.123 5.12e-13 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Rops8g01466 Pkinase 1.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01466 - - gmx:100793659 93.2041