Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01464 ATGTATCTCCTCTGGTGCATAGAGGTTTTGGTAGCAGTTAAGGGATGTGAGCGTGATGGCTTGGTGATGAAGGCGGTTCAACAGATCTGGTCAGCAGTCTATGCATCAGGAATTACAAATTGGTCTACTTATCCTATATTCCTAATCCATGCTGGCGAGGCTTTTCAAGTTATGCATCTCCATTCTACATCAGGGACTGATTATGCATTGCTTCGTTCAATTGCAGCAATGGATAGGAATGTGATTATTGCTAACACATTTGGATCATTTACTAGTCACACTTCTGACATTGGGTGGTTTCATATTGTTGGGAGACGCATCAGCAACATTGATGGTGGTTCCTTGACACTATCTTTCCCTCTTGAGGATGCATACAGCAATCAATCTCAAATTCCTCAAACTGTGAGGGCCAAACCTTCACCTCAAATAAAATGTAAGCCCTTGGATAAGATAGCTATAATGCCAGAGATGGAATTAGCAGTGGAAGTGGAAGTACTTGGAAGAGTGAGGCATAAGAATTTGTTGGGATTGAGAGGATTTTATGTAGGGGTAAATGAAAGGTTAATTGTCTATGATTACTTGCCTAATCATAGCATATTCACCCATTTATATGGTCCACTCTCCAAGAGATGTCAGCTAGATTGGTCTAGAAGAATGAGTATAGCAATTGAAGTAGCTGAAGCCTTAGTGTATTTGCGCCATGAGTCAACTCCTCAAATCACACACAGAGATATAAATGCAAACAATGTTCTTTTAGACTCTGACTTTGAAGCTAAGGTTGCTGATTTTGGTTTTGCAAAGCTGAAACCAGATGGCACAACCCATTTTACCAAGTTTATAGCCACCCCAGGATATCTTTCACCAGAATATGTTTCGTGTGGGAATTTTTCTATGGCCTCTGATGTTTACAGCTTTGGAATTTTGCTTTCGGAGATTATTAGTGGCATGAATCTAAATGAGAAATTCACAGGGGAAGTGAAAAGGGATATTGTTCAATGGGTCACACTCTATGTCAACAAGGATCTCTTCAATAATATTGTAGATCCATTGTTGACATATGGCGTGACCCATTTAACAATATCCCTTTTCACTTCCCTAAGCTGGTTGGCTGACGTGTCGTTAATTGGACAGGTCAGTGTCGACGTGGTTGCTGATGTGGTCGTCTTCAACCTTTTTCCGGTACGGCGGTCCGGCAATTCTCCGGCAGAGGTTCGGCGGTCTCCGACGACGGGAAGCGGTGGTCTGGTACGGTTCTCCGACGGTGGTCAACGGCGGCCGAATGTGAAAATTGGTGTCCGAGGGTTTTTGGACCTTCTGAACACAATGACGGCGTTAGTTTTGCAAGAAAATGACCACAAAGTGGAGTTTCAGGGGTGGAAGCTCTCTTGTACCACCGGAAAACTCAAATTTTCCGTTGATTATCTCACACAAACTAAATTCCAGGATCTAGAACCTTGCTCTGTTGCCAAAATGGCTCAGAAACCAGTGAGAAATATCTCTAATACTCAAATATAG 1515 0.4251 MYLLWCIEVLVAVKGCERDGLVMKAVQQIWSAVYASGITNWSTYPIFLIHAGEAFQVMHLHSTSGTDYALLRSIAAMDRNVIIANTFGSFTSHTSDIGWFHIVGRRISNIDGGSLTLSFPLEDAYSNQSQIPQTVRAKPSPQIKCKPLDKIAIMPEMELAVEVEVLGRVRHKNLLGLRGFYVGVNERLIVYDYLPNHSIFTHLYGPLSKRCQLDWSRRMSIAIEVAEALVYLRHESTPQITHRDINANNVLLDSDFEAKVADFGFAKLKPDGTTHFTKFIATPGYLSPEYVSCGNFSMASDVYSFGILLSEIISGMNLNEKFTGEVKRDIVQWVTLYVNKDLFNNIVDPLLTYGVTHLTISLFTSLSWLADVSLIGQVSVDVVADVVVFNLFPVRRSGNSPAEVRRSPTTGSGGLVRFSDGGQRRPNVKIGVRGFLDLLNTMTALVLQENDHKVEFQGWKLSCTTGKLKFSVDYLTQTKFQDLEPCSVAKMAQKPVRNISNTQI* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01464 504 ProSiteProfiles Protein kinase domain profile. 104 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01464 504 Pfam Protein kinase domain 150 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01464 504 PANTHER OS01G0253100 PROTEIN 155 353 - -
Rops8g01464 504 SUPERFAMILY Protein kinase-like (PK-like) 157 354 IPR011009 -
Rops8g01464 504 Gene3D Phosphorylase Kinase; domain 1 136 193 - -
Rops8g01464 504 MobiDBLite consensus disorder prediction 398 420 - -
Rops8g01464 504 Gene3D Transferase(Phosphotransferase) domain 1 194 368 - -
Rops8g01464 504 MobiDBLite consensus disorder prediction 402 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01464 Rops-Chr8 32789735 32797742 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01464 156 351 Trihelix Transcription Factor Family AT1G70460 40.299 5.83e-43 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Rops8g01464 Pkinase 2.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01464 - - gmx:100793659 293.508