Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01459 ATGCAACTTGTATGGCAACATGCACGTGACTCTCAAGGTCCCCACCGAGCACGAGAGTGTGAGTCACTGTCCCCTGGTCCGGATTCAGTTGGGATCTTTGCCATTTCACAAAGTTGCAGTGGAGTGGCAACTCGAGCCTGTGGTCTTGTTAGTTTGGAACGTACAAAGATTGCAGAGATCTTTAAAGATAGTCCATCTTGGTTTCGAGAGTGTCGGAGCCTAGAAGTTTTCACAATGTTTCTTGCGGGAAATGGAGGAACCATTGAACTTGTTTACACTCGGACTTATGCTCCAACGACATTGGCTCCTGTCCGGGATTTCTGGACTCTTAGATACACTACAGGTTTGGATAATGGCAGTCTTGTGGTTTGTGAGAGGTCCCTGGCTGGTTCTGGCACGACCCTAATCCAGCTGCTACTGCTCAGTCTGTAA 432 0.4838 MQLVWQHARDSQGPHRARECESLSPGPDSVGIFAISQSCSGVATRACGLVSLERTKIAEIFKDSPSWFRECRSLEVFTMFLAGNGGTIELVYTRTYAPTTLAPVRDFWTLRYTTGLDNGSLVVCERSLAGSGTTLIQLLLLSL* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01459 143 Gene3D - 32 133 IPR023393 -
Rops8g01459 143 MobiDBLite consensus disorder prediction 1 21 - -
Rops8g01459 143 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 21 132 IPR044830 GO:0003700
Rops8g01459 143 Pfam START domain 24 128 IPR002913 GO:0008289
Rops8g01459 143 SUPERFAMILY Bet v1-like 19 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01459 Rops-Chr8 32625696 32626127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01459 23 132 Homeobox Transcription Factor Family AT5G60690 84.545 2.14e-61 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01459 K09338 - gmx:100804870 204.142